==1018741== Memcheck, a memory error detector ==1018741== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1018741== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1018741== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestSloughingCellKillers -malloc_debug -malloc_dump -memory_info ==1018741== Parent PID: 1002846 ==1018741== ==1018741== ==1018741== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1018741== Open file descriptor 12: ==1018741== at 0x1276222D: pipe (pipe.c:29) ==1018741== by 0x1B43A07D: ??? ==1018741== by 0x165A04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1018741== by 0x11F83418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018741== by 0x11F1CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018741== by 0x10C13D38: PetscInitialize (pinit.c:924) ==1018741== by 0x10A882DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1018741== by 0x10A8832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1018741== by 0x157559: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1018741== by 0x14FA79: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1018741== by 0x152B30: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1018741== by 0x1529D0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1018741== by 0x153067: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1018741== by 0x14DE95: main (TestSloughingCellKillers.cpp:19) ==1018741== ==1018741== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1018741== at 0x12766BCC: __open_nocancel (open64_nocancel.c:39) ==1018741== by 0x126EAC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1018741== by 0x10ABD822: ??? ==1018741== by 0x10ABD96F: ??? ==1018741== by 0x166456DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1018741== by 0x16645938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1018741== by 0x165FB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1018741== by 0x165A02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1018741== by 0x11F83418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018741== by 0x11F1CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018741== by 0x10C13D38: PetscInitialize (pinit.c:924) ==1018741== by 0x10A882DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1018741== by 0x10A8832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1018741== by 0x157559: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1018741== by 0x14FA79: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1018741== by 0x152B30: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1018741== by 0x1529D0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1018741== by 0x153067: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1018741== by 0x14DE95: main (TestSloughingCellKillers.cpp:19) ==1018741== ==1018741== Open file descriptor 116: ==1018741== ==1018741== ==1018741== Open file descriptor 112: ==1018741== ==1018741== ==1018741== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSloughingCellKillers_valgrind.txt ==1018741== ==1018741== ==1018741== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1018741== ==1018741== ==1018741== ==1018741== HEAP SUMMARY: ==1018741== in use at exit: 700,775 bytes in 9,378 blocks ==1018741== total heap usage: 102,993 allocs, 93,615 frees, 1,357,553,556 bytes allocated ==1018741== ==1018741== LEAK SUMMARY: ==1018741== definitely lost: 0 bytes in 0 blocks ==1018741== indirectly lost: 0 bytes in 0 blocks ==1018741== possibly lost: 0 bytes in 0 blocks ==1018741== still reachable: 56 bytes in 3 blocks ==1018741== suppressed: 700,719 bytes in 9,375 blocks ==1018741== Reachable blocks (those to which a pointer was found) are not shown. ==1018741== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1018741== ==1018741== For lists of detected and suppressed errors, rerun with: -s ==1018741== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)