==1018689== Memcheck, a memory error detector ==1018689== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1018689== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1018689== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVanLeeuwen2009WntSwatCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==1018689== Parent PID: 1002846 ==1018689== ==1018689== ==1018689== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1018689== Open file descriptor 12: ==1018689== at 0x128BE22D: pipe (pipe.c:29) ==1018689== by 0x1B43907D: ??? ==1018689== by 0x165EE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1018689== by 0x121C8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018689== by 0x12161D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018689== by 0x10E56D38: PetscInitialize (pinit.c:924) ==1018689== by 0x10CCB2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1018689== by 0x10CCB32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1018689== by 0x135A69: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1018689== by 0x13035D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1018689== by 0x13310C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1018689== by 0x132FAC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1018689== by 0x133643: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1018689== by 0x12E785: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==1018689== ==1018689== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1018689== at 0x128C2BCC: __open_nocancel (open64_nocancel.c:39) ==1018689== by 0x12846C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1018689== by 0x10D00822: ??? ==1018689== by 0x10D0096F: ??? ==1018689== by 0x166936DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1018689== by 0x16693938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1018689== by 0x16649922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1018689== by 0x165EE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1018689== by 0x121C8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018689== by 0x12161D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018689== by 0x10E56D38: PetscInitialize (pinit.c:924) ==1018689== by 0x10CCB2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1018689== by 0x10CCB32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1018689== by 0x135A69: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1018689== by 0x13035D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1018689== by 0x13310C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1018689== by 0x132FAC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1018689== by 0x133643: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1018689== by 0x12E785: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==1018689== ==1018689== Open file descriptor 116: ==1018689== ==1018689== ==1018689== Open file descriptor 112: ==1018689== ==1018689== ==1018689== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVanLeeuwen2009WntSwatCellCycleOdeSystem_valgrind.txt ==1018689== ==1018689== ==1018689== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1018689== ==1018689== ==1018689== ==1018689== HEAP SUMMARY: ==1018689== in use at exit: 700,743 bytes in 9,377 blocks ==1018689== total heap usage: 521,792 allocs, 512,415 frees, 1,562,203,906 bytes allocated ==1018689== ==1018689== LEAK SUMMARY: ==1018689== definitely lost: 0 bytes in 0 blocks ==1018689== indirectly lost: 0 bytes in 0 blocks ==1018689== possibly lost: 0 bytes in 0 blocks ==1018689== still reachable: 24 bytes in 2 blocks ==1018689== suppressed: 700,719 bytes in 9,375 blocks ==1018689== Reachable blocks (those to which a pointer was found) are not shown. ==1018689== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1018689== ==1018689== For lists of detected and suppressed errors, rerun with: -s ==1018689== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)