==1018655== Memcheck, a memory error detector ==1018655== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1018655== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1018655== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVertexCryptBoundaryForce -malloc_debug -malloc_dump -memory_info ==1018655== Parent PID: 1002846 ==1018655== ==1018655== ==1018655== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1018655== Open file descriptor 12: ==1018655== at 0x1118222D: pipe (pipe.c:29) ==1018655== by 0x1B43B07D: ??? ==1018655== by 0x1663D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1018655== by 0x12F09418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018655== by 0x12EA2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018655== by 0x11B99D38: PetscInitialize (pinit.c:924) ==1018655== by 0x10A882DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1018655== by 0x10A8832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1018655== by 0x126BFA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1018655== by 0x11FE6D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1018655== by 0x12291C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1018655== by 0x1227BC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1018655== by 0x122E53: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1018655== by 0x11E295: main (TestVertexCryptBoundaryForce.cpp:19) ==1018655== ==1018655== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1018655== at 0x11186BCC: __open_nocancel (open64_nocancel.c:39) ==1018655== by 0x1110AC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1018655== by 0x10ABD822: ??? ==1018655== by 0x10ABD96F: ??? ==1018655== by 0x166E26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1018655== by 0x166E2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1018655== by 0x16698922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1018655== by 0x1663D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1018655== by 0x12F09418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018655== by 0x12EA2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018655== by 0x11B99D38: PetscInitialize (pinit.c:924) ==1018655== by 0x10A882DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1018655== by 0x10A8832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1018655== by 0x126BFA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1018655== by 0x11FE6D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1018655== by 0x12291C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1018655== by 0x1227BC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1018655== by 0x122E53: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1018655== by 0x11E295: main (TestVertexCryptBoundaryForce.cpp:19) ==1018655== ==1018655== Open file descriptor 116: ==1018655== ==1018655== ==1018655== Open file descriptor 112: ==1018655== ==1018655== ==1018655== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexCryptBoundaryForce_valgrind.txt ==1018655== ==1018655== ==1018655== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1018655== ==1018655== ==1018655== ==1018655== HEAP SUMMARY: ==1018655== in use at exit: 700,775 bytes in 9,378 blocks ==1018655== total heap usage: 58,840 allocs, 49,462 frees, 1,354,261,104 bytes allocated ==1018655== ==1018655== LEAK SUMMARY: ==1018655== definitely lost: 0 bytes in 0 blocks ==1018655== indirectly lost: 0 bytes in 0 blocks ==1018655== possibly lost: 0 bytes in 0 blocks ==1018655== still reachable: 56 bytes in 3 blocks ==1018655== suppressed: 700,719 bytes in 9,375 blocks ==1018655== Reachable blocks (those to which a pointer was found) are not shown. ==1018655== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1018655== ==1018655== For lists of detected and suppressed errors, rerun with: -s ==1018655== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)