==1223826== Memcheck, a memory error detector ==1223826== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1223826== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1223826== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewSrnModelTutorial -malloc_debug -malloc_dump -memory_info ==1223826== Parent PID: 1208515 ==1223826== ==1223826== ==1223826== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1223826== Open file descriptor 12: ==1223826== at 0x1038B22D: pipe (pipe.c:29) ==1223826== by 0x18A1E07D: ??? ==1223826== by 0x13FE14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1223826== by 0xFBAC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1223826== by 0xFB45D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1223826== by 0xE83CD38: PetscInitialize (pinit.c:924) ==1223826== by 0xE6B2153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1223826== by 0xE6B21A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1223826== by 0x2610EB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1223826== by 0x25978B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1223826== by 0x25E30E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1223826== by 0x25E1AF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1223826== by 0x25E845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1223826== by 0x255DF5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==1223826== ==1223826== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1223826== at 0x1038FBCC: __open_nocancel (open64_nocancel.c:39) ==1223826== by 0x10313C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1223826== by 0xE6E6822: ??? ==1223826== by 0xE6E696F: ??? ==1223826== by 0x140866DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1223826== by 0x14086938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1223826== by 0x1403C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1223826== by 0x13FE12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1223826== by 0xFBAC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1223826== by 0xFB45D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1223826== by 0xE83CD38: PetscInitialize (pinit.c:924) ==1223826== by 0xE6B2153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1223826== by 0xE6B21A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1223826== by 0x2610EB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1223826== by 0x25978B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1223826== by 0x25E30E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1223826== by 0x25E1AF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1223826== by 0x25E845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1223826== by 0x255DF5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==1223826== ==1223826== Open file descriptor 116: ==1223826== ==1223826== ==1223826== Open file descriptor 112: ==1223826== ==1223826== ==1223826== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewSrnModelTutorial_valgrind.txt ==1223826== ==1223826== ==1223826== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1223826== ==1223826== ==1223826== ==1223826== HEAP SUMMARY: ==1223826== in use at exit: 700,688 bytes in 9,374 blocks ==1223826== total heap usage: 3,820,538 allocs, 3,811,164 frees, 1,524,923,546 bytes allocated ==1223826== ==1223826== LEAK SUMMARY: ==1223826== definitely lost: 0 bytes in 0 blocks ==1223826== indirectly lost: 0 bytes in 0 blocks ==1223826== possibly lost: 0 bytes in 0 blocks ==1223826== still reachable: 56 bytes in 3 blocks ==1223826== suppressed: 700,632 bytes in 9,371 blocks ==1223826== Reachable blocks (those to which a pointer was found) are not shown. ==1223826== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1223826== ==1223826== For lists of detected and suppressed errors, rerun with: -s ==1223826== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)