==1210711== Memcheck, a memory error detector ==1210711== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1210711== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1210711== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1210711== Parent PID: 1208515 ==1210711== ==1210711== ==1210711== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1210711== Open file descriptor 12: ==1210711== at 0xEC9322D: pipe (pipe.c:29) ==1210711== by 0x18A1F07D: ??? ==1210711== by 0x140224CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1210711== by 0x108EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1210711== by 0x10888D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1210711== by 0xF57FD38: PetscInitialize (pinit.c:924) ==1210711== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1210711== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1210711== by 0x2136F2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1210711== by 0x20AE19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1210711== by 0x20EA68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1210711== by 0x20E908: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1210711== by 0x20EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1210711== by 0x209235: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==1210711== ==1210711== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1210711== at 0xEC97BCC: __open_nocancel (open64_nocancel.c:39) ==1210711== by 0xEC1BC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1210711== by 0xE4A3822: ??? ==1210711== by 0xE4A396F: ??? ==1210711== by 0x140C76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1210711== by 0x140C7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1210711== by 0x1407D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1210711== by 0x140222DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1210711== by 0x108EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1210711== by 0x10888D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1210711== by 0xF57FD38: PetscInitialize (pinit.c:924) ==1210711== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1210711== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1210711== by 0x2136F2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1210711== by 0x20AE19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1210711== by 0x20EA68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1210711== by 0x20E908: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1210711== by 0x20EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1210711== by 0x209235: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==1210711== ==1210711== Open file descriptor 116: ==1210711== ==1210711== ==1210711== Open file descriptor 112: ==1210711== ==1210711== ==1210711== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulation_valgrind.txt ==1210711== ==1210711== ==1210711== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1210711== ==1210711== ==1210711== ==1210711== HEAP SUMMARY: ==1210711== in use at exit: 700,720 bytes in 9,375 blocks ==1210711== total heap usage: 17,974,450 allocs, 17,965,075 frees, 30,089,546,948 bytes allocated ==1210711== ==1210711== LEAK SUMMARY: ==1210711== definitely lost: 0 bytes in 0 blocks ==1210711== indirectly lost: 0 bytes in 0 blocks ==1210711== possibly lost: 0 bytes in 0 blocks ==1210711== still reachable: 88 bytes in 4 blocks ==1210711== suppressed: 700,632 bytes in 9,371 blocks ==1210711== Reachable blocks (those to which a pointer was found) are not shown. ==1210711== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1210711== ==1210711== For lists of detected and suppressed errors, rerun with: -s ==1210711== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)