==50980== Memcheck, a memory error detector ==50980== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==50980== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==50980== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==50980== Parent PID: 49310 ==50980== ==50980== ==50980== FILE DESCRIPTORS: 9 open (3 std) at exit. ==50980== Open file descriptor 12: ==50980== at 0xDCC122D: pipe (pipe.c:29) ==50980== by 0x1977807D: ??? ==50980== by 0x14D7B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==50980== by 0x11562418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==50980== by 0x114FBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==50980== by 0x101F2D38: PetscInitialize (pinit.c:924) ==50980== by 0xD5832DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==50980== by 0xD58332D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==50980== by 0x132B66: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==50980== by 0x12BE63: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==50980== by 0x12E9B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==50980== by 0x12E8B3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==50980== by 0x12EEC7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==50980== by 0x12A665: main (TestCaUpdateRules.cpp:18) ==50980== ==50980== Open file descriptor 8: /dev/shm/open_mpi.0000 ==50980== at 0xDCC5BCC: __open_nocancel (open64_nocancel.c:39) ==50980== by 0xDC49C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==50980== by 0xD5B8822: ??? ==50980== by 0xD5B896F: ??? ==50980== by 0x14E206DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==50980== by 0x14E20938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==50980== by 0x14DD6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==50980== by 0x14D7B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==50980== by 0x11562418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==50980== by 0x114FBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==50980== by 0x101F2D38: PetscInitialize (pinit.c:924) ==50980== by 0xD5832DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==50980== by 0xD58332D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==50980== by 0x132B66: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==50980== by 0x12BE63: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==50980== by 0x12E9B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==50980== by 0x12E8B3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==50980== by 0x12EEC7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==50980== by 0x12A665: main (TestCaUpdateRules.cpp:18) ==50980== ==50980== Open file descriptor 115: ==50980== ==50980== ==50980== Open file descriptor 112: ==50980== ==50980== ==50980== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==50980== ==50980== ==50980== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==50980== ==50980== ==50980== ==50980== HEAP SUMMARY: ==50980== in use at exit: 700,749 bytes in 9,378 blocks ==50980== total heap usage: 58,059 allocs, 48,681 frees, 1,354,263,702 bytes allocated ==50980== ==50980== LEAK SUMMARY: ==50980== definitely lost: 0 bytes in 0 blocks ==50980== indirectly lost: 0 bytes in 0 blocks ==50980== possibly lost: 0 bytes in 0 blocks ==50980== still reachable: 56 bytes in 3 blocks ==50980== suppressed: 700,693 bytes in 9,375 blocks ==50980== Reachable blocks (those to which a pointer was found) are not shown. ==50980== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==50980== ==50980== For lists of detected and suppressed errors, rerun with: -s ==50980== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)