==50989== Memcheck, a memory error detector ==50989== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==50989== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==50989== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellPopulationBoundaryConditions -malloc_debug -malloc_dump -memory_info ==50989== Parent PID: 49310 ==50989== ==50989== ==50989== FILE DESCRIPTORS: 9 open (3 std) at exit. ==50989== Open file descriptor 12: ==50989== at 0xF9ED22D: pipe (pipe.c:29) ==50989== by 0x1977907D: ??? ==50989== by 0x14D854CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==50989== by 0x11649418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==50989== by 0x115E2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==50989== by 0x102D9D38: PetscInitialize (pinit.c:924) ==50989== by 0xF1C82DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==50989== by 0xF1C832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==50989== by 0x1540C6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==50989== by 0x14CC3D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==50989== by 0x14FA92: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==50989== by 0x14F932: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==50989== by 0x14FFC9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==50989== by 0x14B065: main (TestCellPopulationBoundaryConditions.cpp:19) ==50989== ==50989== Open file descriptor 8: /dev/shm/open_mpi.0000 ==50989== at 0xF9F1BCC: __open_nocancel (open64_nocancel.c:39) ==50989== by 0xF975C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==50989== by 0xF1FD822: ??? ==50989== by 0xF1FD96F: ??? ==50989== by 0x14E2A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==50989== by 0x14E2A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==50989== by 0x14DE0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==50989== by 0x14D852DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==50989== by 0x11649418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==50989== by 0x115E2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==50989== by 0x102D9D38: PetscInitialize (pinit.c:924) ==50989== by 0xF1C82DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==50989== by 0xF1C832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==50989== by 0x1540C6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==50989== by 0x14CC3D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==50989== by 0x14FA92: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==50989== by 0x14F932: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==50989== by 0x14FFC9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==50989== by 0x14B065: main (TestCellPopulationBoundaryConditions.cpp:19) ==50989== ==50989== Open file descriptor 115: ==50989== ==50989== ==50989== Open file descriptor 112: ==50989== ==50989== ==50989== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellPopulationBoundaryConditions_valgrind.txt ==50989== ==50989== ==50989== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==50989== ==50989== ==50989== ==50989== HEAP SUMMARY: ==50989== in use at exit: 700,749 bytes in 9,378 blocks ==50989== total heap usage: 72,613 allocs, 63,235 frees, 1,357,563,876 bytes allocated ==50989== ==50989== LEAK SUMMARY: ==50989== definitely lost: 0 bytes in 0 blocks ==50989== indirectly lost: 0 bytes in 0 blocks ==50989== possibly lost: 0 bytes in 0 blocks ==50989== still reachable: 56 bytes in 3 blocks ==50989== suppressed: 700,693 bytes in 9,375 blocks ==50989== Reachable blocks (those to which a pointer was found) are not shown. ==50989== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==50989== ==50989== For lists of detected and suppressed errors, rerun with: -s ==50989== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)