==50583== Memcheck, a memory error detector ==50583== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==50583== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==50583== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellsGenerator -malloc_debug -malloc_dump -memory_info ==50583== Parent PID: 49310 ==50583== ==50583== ==50583== FILE DESCRIPTORS: 9 open (3 std) at exit. ==50583== Open file descriptor 12: ==50583== at 0xF8C222D: pipe (pipe.c:29) ==50583== by 0x1977807D: ??? ==50583== by 0x14D854CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==50583== by 0x11562418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==50583== by 0x114FBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==50583== by 0x101F2D38: PetscInitialize (pinit.c:924) ==50583== by 0xF1C82DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==50583== by 0xF1C832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==50583== by 0x1238A4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==50583== by 0x11E94D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==50583== by 0x121468: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==50583== by 0x121308: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==50583== by 0x12199F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==50583== by 0x11CD75: main (TestCellsGenerator.cpp:19) ==50583== ==50583== Open file descriptor 8: /dev/shm/open_mpi.0000 ==50583== at 0xF8C6BCC: __open_nocancel (open64_nocancel.c:39) ==50583== by 0xF84AC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==50583== by 0xF1FD822: ??? ==50583== by 0xF1FD96F: ??? ==50583== by 0x14E2A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==50583== by 0x14E2A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==50583== by 0x14DE0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==50583== by 0x14D852DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==50583== by 0x11562418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==50583== by 0x114FBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==50583== by 0x101F2D38: PetscInitialize (pinit.c:924) ==50583== by 0xF1C82DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==50583== by 0xF1C832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==50583== by 0x1238A4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==50583== by 0x11E94D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==50583== by 0x121468: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==50583== by 0x121308: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==50583== by 0x12199F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==50583== by 0x11CD75: main (TestCellsGenerator.cpp:19) ==50583== ==50583== Open file descriptor 115: ==50583== ==50583== ==50583== Open file descriptor 112: ==50583== ==50583== ==50583== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellsGenerator_valgrind.txt ==50583== ==50583== ==50583== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==50583== ==50583== ==50583== ==50583== HEAP SUMMARY: ==50583== in use at exit: 700,813 bytes in 9,379 blocks ==50583== total heap usage: 71,736 allocs, 62,357 frees, 1,355,787,483 bytes allocated ==50583== ==50583== LEAK SUMMARY: ==50583== definitely lost: 0 bytes in 0 blocks ==50583== indirectly lost: 0 bytes in 0 blocks ==50583== possibly lost: 0 bytes in 0 blocks ==50583== still reachable: 120 bytes in 4 blocks ==50583== suppressed: 700,693 bytes in 9,375 blocks ==50583== Reachable blocks (those to which a pointer was found) are not shown. ==50583== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==50583== ==50583== For lists of detected and suppressed errors, rerun with: -s ==50583== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)