==65273== Memcheck, a memory error detector ==65273== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==65273== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==65273== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==65273== Parent PID: 49310 ==65273== ==65273== ==65273== FILE DESCRIPTORS: 9 open (3 std) at exit. ==65273== Open file descriptor 12: ==65273== at 0x112AD22D: pipe (pipe.c:29) ==65273== by 0x1B43B07D: ??? ==65273== by 0x1663D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==65273== by 0x12F09418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==65273== by 0x12EA2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==65273== by 0x11B99D38: PetscInitialize (pinit.c:924) ==65273== by 0x10A882DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==65273== by 0x10A8832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==65273== by 0x23B384: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==65273== by 0x231879: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==65273== by 0x235FAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==65273== by 0x235E4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==65273== by 0x2364E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==65273== by 0x22FC95: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==65273== ==65273== Open file descriptor 8: /dev/shm/open_mpi.0000 ==65273== at 0x112B1BCC: __open_nocancel (open64_nocancel.c:39) ==65273== by 0x11235C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==65273== by 0x10ABD822: ??? ==65273== by 0x10ABD96F: ??? ==65273== by 0x166E26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==65273== by 0x166E2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==65273== by 0x16698922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==65273== by 0x1663D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==65273== by 0x12F09418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==65273== by 0x12EA2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==65273== by 0x11B99D38: PetscInitialize (pinit.c:924) ==65273== by 0x10A882DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==65273== by 0x10A8832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==65273== by 0x23B384: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==65273== by 0x231879: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==65273== by 0x235FAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==65273== by 0x235E4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==65273== by 0x2364E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==65273== by 0x22FC95: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==65273== ==65273== Open file descriptor 115: ==65273== ==65273== ==65273== Open file descriptor 112: ==65273== ==65273== ==65273== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==65273== ==65273== ==65273== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==65273== ==65273== ==65273== ==65273== HEAP SUMMARY: ==65273== in use at exit: 700,700 bytes in 9,374 blocks ==65273== total heap usage: 6,310,233 allocs, 6,300,859 frees, 2,072,761,896 bytes allocated ==65273== ==65273== LEAK SUMMARY: ==65273== definitely lost: 0 bytes in 0 blocks ==65273== indirectly lost: 0 bytes in 0 blocks ==65273== possibly lost: 0 bytes in 0 blocks ==65273== still reachable: 56 bytes in 3 blocks ==65273== suppressed: 700,644 bytes in 9,371 blocks ==65273== Reachable blocks (those to which a pointer was found) are not shown. ==65273== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==65273== ==65273== For lists of detected and suppressed errors, rerun with: -s ==65273== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)