==67637== Memcheck, a memory error detector ==67637== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==67637== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==67637== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHdf5ToVisualizerConverters -malloc_debug -malloc_dump -memory_info ==67637== Parent PID: 49310 ==67637== ==67637== ==67637== FILE DESCRIPTORS: 9 open (3 std) at exit. ==67637== Open file descriptor 12: ==67637== at 0xA89222D: pipe (pipe.c:29) ==67637== by 0x1430F07D: ??? ==67637== by 0xFB134CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==67637== by 0xBF8A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==67637== by 0xBF23D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==67637== by 0xAC1AD38: PetscInitialize (pinit.c:924) ==67637== by 0xA17C2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==67637== by 0xA17C32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==67637== by 0x124324: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==67637== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==67637== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==67637== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==67637== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==67637== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==67637== ==67637== Open file descriptor 8: /dev/shm/open_mpi.0000 ==67637== at 0xA896BCC: __open_nocancel (open64_nocancel.c:39) ==67637== by 0xA81AC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==67637== by 0xA1B1822: ??? ==67637== by 0xA1B196F: ??? ==67637== by 0xFBB86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==67637== by 0xFBB8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==67637== by 0xFB6E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==67637== by 0xFB132DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==67637== by 0xBF8A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==67637== by 0xBF23D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==67637== by 0xAC1AD38: PetscInitialize (pinit.c:924) ==67637== by 0xA17C2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==67637== by 0xA17C32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==67637== by 0x124324: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==67637== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==67637== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==67637== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==67637== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==67637== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==67637== ==67637== Open file descriptor 115: ==67637== ==67637== ==67637== Open file descriptor 112: ==67637== ==67637== ==67637== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5ToVisualizerConverters_valgrind.txt ==67637== ==67637== ==67637== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==67637== ==67637== ==67637== ==67637== HEAP SUMMARY: ==67637== in use at exit: 700,733 bytes in 9,377 blocks ==67637== total heap usage: 125,304 allocs, 115,927 frees, 1,382,167,505 bytes allocated ==67637== ==67637== LEAK SUMMARY: ==67637== definitely lost: 0 bytes in 0 blocks ==67637== indirectly lost: 0 bytes in 0 blocks ==67637== possibly lost: 0 bytes in 0 blocks ==67637== still reachable: 24 bytes in 2 blocks ==67637== suppressed: 700,709 bytes in 9,375 blocks ==67637== Reachable blocks (those to which a pointer was found) are not shown. ==67637== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==67637== ==67637== For lists of detected and suppressed errors, rerun with: -s ==67637== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)