==51343== Memcheck, a memory error detector ==51343== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==51343== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==51343== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNumericalMethods -malloc_debug -malloc_dump -memory_info ==51343== Parent PID: 49310 ==51343== ==51343== ==51343== FILE DESCRIPTORS: 9 open (3 std) at exit. ==51343== Open file descriptor 12: ==51343== at 0xF9A922D: pipe (pipe.c:29) ==51343== by 0x1977907D: ??? ==51343== by 0x14D854CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==51343== by 0x11649418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==51343== by 0x115E2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==51343== by 0x102D9D38: PetscInitialize (pinit.c:924) ==51343== by 0xF1C82DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==51343== by 0xF1C832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==51343== by 0x139600: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==51343== by 0x13408D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==51343== by 0x136E14: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==51343== by 0x136CB4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==51343== by 0x13734B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==51343== by 0x1324B5: main (TestNumericalMethods.cpp:19) ==51343== ==51343== Open file descriptor 8: /dev/shm/open_mpi.0000 ==51343== at 0xF9ADBCC: __open_nocancel (open64_nocancel.c:39) ==51343== by 0xF931C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==51343== by 0xF1FD822: ??? ==51343== by 0xF1FD96F: ??? ==51343== by 0x14E2A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==51343== by 0x14E2A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==51343== by 0x14DE0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==51343== by 0x14D852DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==51343== by 0x11649418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==51343== by 0x115E2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==51343== by 0x102D9D38: PetscInitialize (pinit.c:924) ==51343== by 0xF1C82DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==51343== by 0xF1C832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==51343== by 0x139600: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==51343== by 0x13408D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==51343== by 0x136E14: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==51343== by 0x136CB4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==51343== by 0x13734B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==51343== by 0x1324B5: main (TestNumericalMethods.cpp:19) ==51343== ==51343== Open file descriptor 115: ==51343== ==51343== ==51343== Open file descriptor 112: ==51343== ==51343== ==51343== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNumericalMethods_valgrind.txt ==51343== ==51343== ==51343== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==51343== ==51343== ==51343== ==51343== HEAP SUMMARY: ==51343== in use at exit: 700,749 bytes in 9,378 blocks ==51343== total heap usage: 71,509 allocs, 62,131 frees, 1,356,940,654 bytes allocated ==51343== ==51343== LEAK SUMMARY: ==51343== definitely lost: 0 bytes in 0 blocks ==51343== indirectly lost: 0 bytes in 0 blocks ==51343== possibly lost: 0 bytes in 0 blocks ==51343== still reachable: 56 bytes in 3 blocks ==51343== suppressed: 700,693 bytes in 9,375 blocks ==51343== Reachable blocks (those to which a pointer was found) are not shown. ==51343== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==51343== ==51343== For lists of detected and suppressed errors, rerun with: -s ==51343== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)