==65088== Memcheck, a memory error detector ==65088== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==65088== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==65088== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOdeBasedCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==65088== Parent PID: 49310 ==65088== ==65088== ==65088== FILE DESCRIPTORS: 9 open (3 std) at exit. ==65088== Open file descriptor 12: ==65088== at 0x10C7B22D: pipe (pipe.c:29) ==65088== by 0x1B43C07D: ??? ==65088== by 0x155DC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==65088== by 0x10583418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==65088== by 0x1051CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==65088== by 0xF213D38: PetscInitialize (pinit.c:924) ==65088== by 0xF0882DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==65088== by 0xF08832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==65088== by 0x192669: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==65088== by 0x18A60B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==65088== by 0x18DC08: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==65088== by 0x18DAA8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==65088== by 0x18E13F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==65088== by 0x186F35: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==65088== ==65088== Open file descriptor 8: /dev/shm/open_mpi.0000 ==65088== at 0x10C7FBCC: __open_nocancel (open64_nocancel.c:39) ==65088== by 0x10C03C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==65088== by 0xF0BD822: ??? ==65088== by 0xF0BD96F: ??? ==65088== by 0x156816DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==65088== by 0x15681938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==65088== by 0x15637922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==65088== by 0x155DC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==65088== by 0x10583418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==65088== by 0x1051CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==65088== by 0xF213D38: PetscInitialize (pinit.c:924) ==65088== by 0xF0882DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==65088== by 0xF08832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==65088== by 0x192669: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==65088== by 0x18A60B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==65088== by 0x18DC08: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==65088== by 0x18DAA8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==65088== by 0x18E13F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==65088== by 0x186F35: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==65088== ==65088== Open file descriptor 115: ==65088== ==65088== ==65088== Open file descriptor 112: ==65088== ==65088== ==65088== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModelsForCrypt_valgrind.txt ==65088== ==65088== ==65088== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==65088== ==65088== ==65088== ==65088== HEAP SUMMARY: ==65088== in use at exit: 700,829 bytes in 9,379 blocks ==65088== total heap usage: 864,333 allocs, 854,954 frees, 1,475,993,036 bytes allocated ==65088== ==65088== LEAK SUMMARY: ==65088== definitely lost: 0 bytes in 0 blocks ==65088== indirectly lost: 0 bytes in 0 blocks ==65088== possibly lost: 0 bytes in 0 blocks ==65088== still reachable: 120 bytes in 4 blocks ==65088== suppressed: 700,709 bytes in 9,375 blocks ==65088== Reachable blocks (those to which a pointer was found) are not shown. ==65088== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==65088== ==65088== For lists of detected and suppressed errors, rerun with: -s ==65088== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)