==51505== Memcheck, a memory error detector ==51505== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==51505== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==51505== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation3d -malloc_debug -malloc_dump -memory_info ==51505== Parent PID: 49310 ==51505== ==51505== ==51505== FILE DESCRIPTORS: 9 open (3 std) at exit. ==51505== Open file descriptor 12: ==51505== at 0x10EA222D: pipe (pipe.c:29) ==51505== by 0x1977807D: ??? ==51505== by 0x14CF34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==51505== by 0x106C3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==51505== by 0x1065CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==51505== by 0xF353D38: PetscInitialize (pinit.c:924) ==51505== by 0xF1C82DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==51505== by 0xF1C832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==51505== by 0x1FF4E9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==51505== by 0x1F945F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==51505== by 0x1FC774: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==51505== by 0x1FC670: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==51505== by 0x1FCC83: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==51505== by 0x1F7C55: main (TestOffLatticeSimulation3d.cpp:18) ==51505== ==51505== Open file descriptor 8: /dev/shm/open_mpi.0000 ==51505== at 0x10EA6BCC: __open_nocancel (open64_nocancel.c:39) ==51505== by 0x10E2AC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==51505== by 0xF1FD822: ??? ==51505== by 0xF1FD96F: ??? ==51505== by 0x14D986DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==51505== by 0x14D98938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==51505== by 0x14D4E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==51505== by 0x14CF32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==51505== by 0x106C3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==51505== by 0x1065CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==51505== by 0xF353D38: PetscInitialize (pinit.c:924) ==51505== by 0xF1C82DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==51505== by 0xF1C832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==51505== by 0x1FF4E9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==51505== by 0x1F945F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==51505== by 0x1FC774: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==51505== by 0x1FC670: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==51505== by 0x1FCC83: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==51505== by 0x1F7C55: main (TestOffLatticeSimulation3d.cpp:18) ==51505== ==51505== Open file descriptor 115: ==51505== ==51505== ==51505== Open file descriptor 112: ==51505== ==51505== ==51505== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation3d_valgrind.txt ==51505== ==51505== ==51505== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==51505== ==51505== ==51505== ==51505== HEAP SUMMARY: ==51505== in use at exit: 700,749 bytes in 9,378 blocks ==51505== total heap usage: 857,127 allocs, 847,749 frees, 1,519,173,125 bytes allocated ==51505== ==51505== LEAK SUMMARY: ==51505== definitely lost: 0 bytes in 0 blocks ==51505== indirectly lost: 0 bytes in 0 blocks ==51505== possibly lost: 0 bytes in 0 blocks ==51505== still reachable: 56 bytes in 3 blocks ==51505== suppressed: 700,693 bytes in 9,375 blocks ==51505== Reachable blocks (those to which a pointer was found) are not shown. ==51505== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==51505== ==51505== For lists of detected and suppressed errors, rerun with: -s ==51505== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)