==64921== Memcheck, a memory error detector ==64921== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==64921== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==64921== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningMeshBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==64921== Parent PID: 49310 ==64921== ==64921== ==64921== FILE DESCRIPTORS: 9 open (3 std) at exit. ==64921== Open file descriptor 12: ==64921== at 0x10D7922D: pipe (pipe.c:29) ==64921== by 0x1977807D: ??? ==64921== by 0x14CF34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==64921== by 0x10681418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==64921== by 0x1061AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==64921== by 0xF2F1D38: PetscInitialize (pinit.c:924) ==64921== by 0xF1C82DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==64921== by 0xF1C832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==64921== by 0x121289: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==64921== by 0x11C86D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==64921== by 0x11EE5C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==64921== by 0x11ECFC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==64921== by 0x11F393: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==64921== by 0x11AC95: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==64921== ==64921== Open file descriptor 8: /dev/shm/open_mpi.0000 ==64921== at 0x10D7DBCC: __open_nocancel (open64_nocancel.c:39) ==64921== by 0x10D01C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==64921== by 0x1057B822: ??? ==64921== by 0x1057B96F: ??? ==64921== by 0x14D986DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==64921== by 0x14D98938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==64921== by 0x14D4E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==64921== by 0x14CF32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==64921== by 0x10681418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==64921== by 0x1061AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==64921== by 0xF2F1D38: PetscInitialize (pinit.c:924) ==64921== by 0xF1C82DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==64921== by 0xF1C832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==64921== by 0x121289: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==64921== by 0x11C86D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==64921== by 0x11EE5C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==64921== by 0x11ECFC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==64921== by 0x11F393: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==64921== by 0x11AC95: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==64921== ==64921== Open file descriptor 115: ==64921== ==64921== ==64921== Open file descriptor 112: ==64921== ==64921== ==64921== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedSimulationsTutorial_valgrind.txt ==64921== ==64921== ==64921== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==64921== ==64921== ==64921== ==64921== HEAP SUMMARY: ==64921== in use at exit: 700,749 bytes in 9,378 blocks ==64921== total heap usage: 3,340,126 allocs, 3,330,748 frees, 2,282,315,894 bytes allocated ==64921== ==64921== LEAK SUMMARY: ==64921== definitely lost: 0 bytes in 0 blocks ==64921== indirectly lost: 0 bytes in 0 blocks ==64921== possibly lost: 0 bytes in 0 blocks ==64921== still reachable: 56 bytes in 3 blocks ==64921== suppressed: 700,693 bytes in 9,375 blocks ==64921== Reachable blocks (those to which a pointer was found) are not shown. ==64921== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==64921== ==64921== For lists of detected and suppressed errors, rerun with: -s ==64921== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)