==64977== Memcheck, a memory error detector ==64977== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==64977== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==64977== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningPottsBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==64977== Parent PID: 49310 ==64977== ==64977== ==64977== FILE DESCRIPTORS: 9 open (3 std) at exit. ==64977== Open file descriptor 12: ==64977== at 0xDC7F22D: pipe (pipe.c:29) ==64977== by 0x1977807D: ??? ==64977== by 0x14D7B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==64977== by 0x11562418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==64977== by 0x114FBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==64977== by 0x101F2D38: PetscInitialize (pinit.c:924) ==64977== by 0xD5832DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==64977== by 0xD58332D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==64977== by 0x123754: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==64977== by 0x11EC6D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==64977== by 0x12128E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==64977== by 0x12112E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==64977== by 0x1217C5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==64977== by 0x11D095: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==64977== ==64977== Open file descriptor 8: /dev/shm/open_mpi.0000 ==64977== at 0xDC83BCC: __open_nocancel (open64_nocancel.c:39) ==64977== by 0xDC07C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==64977== by 0xD5B8822: ??? ==64977== by 0xD5B896F: ??? ==64977== by 0x14E206DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==64977== by 0x14E20938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==64977== by 0x14DD6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==64977== by 0x14D7B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==64977== by 0x11562418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==64977== by 0x114FBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==64977== by 0x101F2D38: PetscInitialize (pinit.c:924) ==64977== by 0xD5832DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==64977== by 0xD58332D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==64977== by 0x123754: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==64977== by 0x11EC6D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==64977== by 0x12128E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==64977== by 0x12112E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==64977== by 0x1217C5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==64977== by 0x11D095: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==64977== ==64977== Open file descriptor 115: ==64977== ==64977== ==64977== Open file descriptor 112: ==64977== ==64977== ==64977== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningPottsBasedSimulationsTutorial_valgrind.txt ==64977== ==64977== ==64977== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==64977== ==64977== ==64977== ==64977== HEAP SUMMARY: ==64977== in use at exit: 700,684 bytes in 9,374 blocks ==64977== total heap usage: 40,689,211 allocs, 40,679,837 frees, 3,845,599,586 bytes allocated ==64977== ==64977== LEAK SUMMARY: ==64977== definitely lost: 0 bytes in 0 blocks ==64977== indirectly lost: 0 bytes in 0 blocks ==64977== possibly lost: 0 bytes in 0 blocks ==64977== still reachable: 56 bytes in 3 blocks ==64977== suppressed: 700,628 bytes in 9,371 blocks ==64977== Reachable blocks (those to which a pointer was found) are not shown. ==64977== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==64977== ==64977== For lists of detected and suppressed errors, rerun with: -s ==64977== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)