==149677== Memcheck, a memory error detector ==149677== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==149677== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==149677== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/Test2dVertexBasedSimulationWithSrnModels -malloc_debug -malloc_dump -memory_info ==149677== Parent PID: 147781 ==149677== ==149677== ==149677== FILE DESCRIPTORS: 9 open (3 std) at exit. ==149677== Open file descriptor 12: ==149677== at 0xF8C022D: pipe (pipe.c:29) ==149677== by 0x1977707D: ??? ==149677== by 0x14D854CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==149677== by 0x11560418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==149677== by 0x114F9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==149677== by 0x101F0D38: PetscInitialize (pinit.c:924) ==149677== by 0xF1C62DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==149677== by 0xF1C632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==149677== by 0x1221BE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==149677== by 0x11D92D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==149677== by 0x11FD1C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==149677== by 0x11FBBC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==149677== by 0x120253: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==149677== by 0x11BD55: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==149677== ==149677== Open file descriptor 8: /dev/shm/open_mpi.0000 ==149677== at 0xF8C4BCC: __open_nocancel (open64_nocancel.c:39) ==149677== by 0xF848C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==149677== by 0xF1FB822: ??? ==149677== by 0xF1FB96F: ??? ==149677== by 0x14E2A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==149677== by 0x14E2A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==149677== by 0x14DE0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==149677== by 0x14D852DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==149677== by 0x11560418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==149677== by 0x114F9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==149677== by 0x101F0D38: PetscInitialize (pinit.c:924) ==149677== by 0xF1C62DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==149677== by 0xF1C632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==149677== by 0x1221BE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==149677== by 0x11D92D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==149677== by 0x11FD1C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==149677== by 0x11FBBC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==149677== by 0x120253: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==149677== by 0x11BD55: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==149677== ==149677== Open file descriptor 115: ==149677== ==149677== ==149677== Open file descriptor 112: ==149677== ==149677== ==149677== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/Test2dVertexBasedSimulationWithSrnModels_valgrind.txt ==149677== ==149677== ==149677== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==149677== ==149677== ==149677== ==149677== HEAP SUMMARY: ==149677== in use at exit: 700,754 bytes in 9,378 blocks ==149677== total heap usage: 1,127,456 allocs, 1,118,078 frees, 1,431,117,490 bytes allocated ==149677== ==149677== LEAK SUMMARY: ==149677== definitely lost: 0 bytes in 0 blocks ==149677== indirectly lost: 0 bytes in 0 blocks ==149677== possibly lost: 0 bytes in 0 blocks ==149677== still reachable: 56 bytes in 3 blocks ==149677== suppressed: 700,698 bytes in 9,375 blocks ==149677== Reachable blocks (those to which a pointer was found) are not shown. ==149677== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==149677== ==149677== For lists of detected and suppressed errors, rerun with: -s ==149677== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)