==149453== Memcheck, a memory error detector ==149453== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==149453== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==149453== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==149453== Parent PID: 147781 ==149453== ==149453== ==149453== FILE DESCRIPTORS: 9 open (3 std) at exit. ==149453== Open file descriptor 12: ==149453== at 0xDCC122D: pipe (pipe.c:29) ==149453== by 0x1977607D: ??? ==149453== by 0x14D794CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==149453== by 0x11560418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==149453== by 0x114F9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==149453== by 0x101F0D38: PetscInitialize (pinit.c:924) ==149453== by 0xD5832DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==149453== by 0xD58332D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==149453== by 0x132B66: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==149453== by 0x12BE63: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==149453== by 0x12E9B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==149453== by 0x12E8B3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==149453== by 0x12EEC7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==149453== by 0x12A665: main (TestCaUpdateRules.cpp:18) ==149453== ==149453== Open file descriptor 8: /dev/shm/open_mpi.0000 ==149453== at 0xDCC5BCC: __open_nocancel (open64_nocancel.c:39) ==149453== by 0xDC49C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==149453== by 0xD5B8822: ??? ==149453== by 0xD5B896F: ??? ==149453== by 0x14E1E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==149453== by 0x14E1E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==149453== by 0x14DD4922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==149453== by 0x14D792DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==149453== by 0x11560418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==149453== by 0x114F9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==149453== by 0x101F0D38: PetscInitialize (pinit.c:924) ==149453== by 0xD5832DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==149453== by 0xD58332D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==149453== by 0x132B66: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==149453== by 0x12BE63: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==149453== by 0x12E9B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==149453== by 0x12E8B3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==149453== by 0x12EEC7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==149453== by 0x12A665: main (TestCaUpdateRules.cpp:18) ==149453== ==149453== Open file descriptor 115: ==149453== ==149453== ==149453== Open file descriptor 112: ==149453== ==149453== ==149453== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==149453== ==149453== ==149453== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==149453== ==149453== ==149453== ==149453== HEAP SUMMARY: ==149453== in use at exit: 700,754 bytes in 9,378 blocks ==149453== total heap usage: 58,058 allocs, 48,680 frees, 1,354,263,802 bytes allocated ==149453== ==149453== LEAK SUMMARY: ==149453== definitely lost: 0 bytes in 0 blocks ==149453== indirectly lost: 0 bytes in 0 blocks ==149453== possibly lost: 0 bytes in 0 blocks ==149453== still reachable: 56 bytes in 3 blocks ==149453== suppressed: 700,698 bytes in 9,375 blocks ==149453== Reachable blocks (those to which a pointer was found) are not shown. ==149453== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==149453== ==149453== For lists of detected and suppressed errors, rerun with: -s ==149453== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)