==149864== Memcheck, a memory error detector
==149864== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al.
==149864== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info
==149864== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestImmersedBoundarySimulationModifier -malloc_debug -malloc_dump -memory_info
==149864== Parent PID: 147781
==149864== 
==149864== 
==149864== FILE DESCRIPTORS: 9 open (3 std) at exit.
==149864== Open file descriptor 12:
==149864==    at 0x10DB922D: pipe (pipe.c:29)
==149864==    by 0x1977607D: ???
==149864==    by 0x14CF34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==149864==    by 0x106C1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==149864==    by 0x1065AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==149864==    by 0xF351D38: PetscInitialize (pinit.c:924)
==149864==    by 0xF1C62DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==149864==    by 0xF1C632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==149864==    by 0x150109: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70)
==149864==    by 0x1489AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==149864==    by 0x14BA82: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==149864==    by 0x14B922: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==149864==    by 0x14BFB9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==149864==    by 0x146DD5: main (TestImmersedBoundarySimulationModifier.cpp:19)
==149864== 
==149864== Open file descriptor 8: /dev/shm/open_mpi.0000
==149864==    at 0x10DBDBCC: __open_nocancel (open64_nocancel.c:39)
==149864==    by 0x10D41C4F: shm_open@@GLIBC_2.34 (shm_open.c:40)
==149864==    by 0xF1FB822: ???
==149864==    by 0xF1FB96F: ???
==149864==    by 0x14D986DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==149864==    by 0x14D98938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==149864==    by 0x14D4E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==149864==    by 0x14CF32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==149864==    by 0x106C1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==149864==    by 0x1065AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==149864==    by 0xF351D38: PetscInitialize (pinit.c:924)
==149864==    by 0xF1C62DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==149864==    by 0xF1C632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==149864==    by 0x150109: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70)
==149864==    by 0x1489AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==149864==    by 0x14BA82: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==149864==    by 0x14B922: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==149864==    by 0x14BFB9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==149864==    by 0x146DD5: main (TestImmersedBoundarySimulationModifier.cpp:19)
==149864== 
==149864== Open file descriptor 115:
==149864==    <inherited from parent>
==149864== 
==149864== Open file descriptor 112:
==149864==    <inherited from parent>
==149864== 
==149864== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestImmersedBoundarySimulationModifier_valgrind.txt
==149864==    <inherited from parent>
==149864== 
==149864== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp
==149864==    <inherited from parent>
==149864== 
==149864== 
==149864== HEAP SUMMARY:
==149864==     in use at exit: 700,946 bytes in 9,382 blocks
==149864==   total heap usage: 2,138,262 allocs, 2,128,880 frees, 1,516,962,566 bytes allocated
==149864== 
==149864== 48 bytes in 1 blocks are definitely lost in loss record 27 of 70
==149864==    at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so)
==149864==    by 0xE7B39DF: ImmersedBoundaryMesh<2u, 2u>::ImmersedBoundaryMesh(std::vector<Node<2u>*, std::allocator<Node<2u>*> >, std::vector<ImmersedBoundaryElement<2u, 2u>*, std::allocator<ImmersedBoundaryElement<2u, 2u>*> >, std::vector<ImmersedBoundaryElement<1u, 2u>*, std::allocator<ImmersedBoundaryElement<1u, 2u>*> >, unsigned int, unsigned int) (ImmersedBoundaryMesh.cpp:132)
==149864==    by 0x1581F1: TestImmersedBoundarySimulationModifier::TestPropagateFluidSourcesToGrid() (TestImmersedBoundarySimulationModifier.hpp:312)
==149864==    by 0x164B24: TestDescription_TestImmersedBoundarySimulationModifier_TestPropagateFluidSourcesToGrid::runTest() (TestImmersedBoundarySimulationModifier.cpp:61)
==149864==    by 0x148091: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96)
==149864==    by 0x14BD30: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74)
==149864==    by 0x14BC15: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61)
==149864==    by 0x14BABB: CxxTest::TestRunner::runWorld() (TestRunner.h:46)
==149864==    by 0x14B922: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==149864==    by 0x14BFB9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==149864==    by 0x146DD5: main (TestImmersedBoundarySimulationModifier.cpp:19)
==149864== 
{
   <insert_a_suppression_name_here>
   Memcheck:Leak
   match-leak-kinds: definite
   fun:_Znwm
   fun:_ZN20ImmersedBoundaryMeshILj2ELj2EEC1ESt6vectorIP4NodeILj2EESaIS4_EES1_IP23ImmersedBoundaryElementILj2ELj2EESaIS9_EES1_IPS7_ILj1ELj2EESaISD_EEjj
   fun:_ZN38TestImmersedBoundarySimulationModifier31TestPropagateFluidSourcesToGridEv
   fun:_ZN86TestDescription_TestImmersedBoundarySimulationModifier_TestPropagateFluidSourcesToGrid7runTestEv
   fun:_ZN7CxxTest19RealTestDescription3runEv
   fun:_ZN7CxxTest10TestRunner7runTestERNS_15TestDescriptionE
   fun:_ZN7CxxTest10TestRunner8runSuiteERNS_16SuiteDescriptionE
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==149864== 48 bytes in 1 blocks are definitely lost in loss record 28 of 70
==149864==    at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so)
==149864==    by 0xE7B3B59: ImmersedBoundaryMesh<2u, 2u>::ImmersedBoundaryMesh(std::vector<Node<2u>*, std::allocator<Node<2u>*> >, std::vector<ImmersedBoundaryElement<2u, 2u>*, std::allocator<ImmersedBoundaryElement<2u, 2u>*> >, std::vector<ImmersedBoundaryElement<1u, 2u>*, std::allocator<ImmersedBoundaryElement<1u, 2u>*> >, unsigned int, unsigned int) (ImmersedBoundaryMesh.cpp:152)
==149864==    by 0x1581F1: TestImmersedBoundarySimulationModifier::TestPropagateFluidSourcesToGrid() (TestImmersedBoundarySimulationModifier.hpp:312)
==149864==    by 0x164B24: TestDescription_TestImmersedBoundarySimulationModifier_TestPropagateFluidSourcesToGrid::runTest() (TestImmersedBoundarySimulationModifier.cpp:61)
==149864==    by 0x148091: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96)
==149864==    by 0x14BD30: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74)
==149864==    by 0x14BC15: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61)
==149864==    by 0x14BABB: CxxTest::TestRunner::runWorld() (TestRunner.h:46)
==149864==    by 0x14B922: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==149864==    by 0x14BFB9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==149864==    by 0x146DD5: main (TestImmersedBoundarySimulationModifier.cpp:19)
==149864== 
{
   <insert_a_suppression_name_here>
   Memcheck:Leak
   match-leak-kinds: definite
   fun:_Znwm
   fun:_ZN20ImmersedBoundaryMeshILj2ELj2EEC1ESt6vectorIP4NodeILj2EESaIS4_EES1_IP23ImmersedBoundaryElementILj2ELj2EESaIS9_EES1_IPS7_ILj1ELj2EESaISD_EEjj
   fun:_ZN38TestImmersedBoundarySimulationModifier31TestPropagateFluidSourcesToGridEv
   fun:_ZN86TestDescription_TestImmersedBoundarySimulationModifier_TestPropagateFluidSourcesToGrid7runTestEv
   fun:_ZN7CxxTest19RealTestDescription3runEv
   fun:_ZN7CxxTest10TestRunner7runTestERNS_15TestDescriptionE
   fun:_ZN7CxxTest10TestRunner8runSuiteERNS_16SuiteDescriptionE
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==149864== 48 bytes in 1 blocks are definitely lost in loss record 29 of 70
==149864==    at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so)
==149864==    by 0xE7B39DF: ImmersedBoundaryMesh<2u, 2u>::ImmersedBoundaryMesh(std::vector<Node<2u>*, std::allocator<Node<2u>*> >, std::vector<ImmersedBoundaryElement<2u, 2u>*, std::allocator<ImmersedBoundaryElement<2u, 2u>*> >, std::vector<ImmersedBoundaryElement<1u, 2u>*, std::allocator<ImmersedBoundaryElement<1u, 2u>*> >, unsigned int, unsigned int) (ImmersedBoundaryMesh.cpp:132)
==149864==    by 0x15945F: TestImmersedBoundarySimulationModifier::TestPropagateFluidSourcesToGrid() (TestImmersedBoundarySimulationModifier.hpp:381)
==149864==    by 0x164B24: TestDescription_TestImmersedBoundarySimulationModifier_TestPropagateFluidSourcesToGrid::runTest() (TestImmersedBoundarySimulationModifier.cpp:61)
==149864==    by 0x148091: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96)
==149864==    by 0x14BD30: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74)
==149864==    by 0x14BC15: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61)
==149864==    by 0x14BABB: CxxTest::TestRunner::runWorld() (TestRunner.h:46)
==149864==    by 0x14B922: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==149864==    by 0x14BFB9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==149864==    by 0x146DD5: main (TestImmersedBoundarySimulationModifier.cpp:19)
==149864== 
{
   <insert_a_suppression_name_here>
   Memcheck:Leak
   match-leak-kinds: definite
   fun:_Znwm
   fun:_ZN20ImmersedBoundaryMeshILj2ELj2EEC1ESt6vectorIP4NodeILj2EESaIS4_EES1_IP23ImmersedBoundaryElementILj2ELj2EESaIS9_EES1_IPS7_ILj1ELj2EESaISD_EEjj
   fun:_ZN38TestImmersedBoundarySimulationModifier31TestPropagateFluidSourcesToGridEv
   fun:_ZN86TestDescription_TestImmersedBoundarySimulationModifier_TestPropagateFluidSourcesToGrid7runTestEv
   fun:_ZN7CxxTest19RealTestDescription3runEv
   fun:_ZN7CxxTest10TestRunner7runTestERNS_15TestDescriptionE
   fun:_ZN7CxxTest10TestRunner8runSuiteERNS_16SuiteDescriptionE
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==149864== 48 bytes in 1 blocks are definitely lost in loss record 30 of 70
==149864==    at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so)
==149864==    by 0xE7B3B59: ImmersedBoundaryMesh<2u, 2u>::ImmersedBoundaryMesh(std::vector<Node<2u>*, std::allocator<Node<2u>*> >, std::vector<ImmersedBoundaryElement<2u, 2u>*, std::allocator<ImmersedBoundaryElement<2u, 2u>*> >, std::vector<ImmersedBoundaryElement<1u, 2u>*, std::allocator<ImmersedBoundaryElement<1u, 2u>*> >, unsigned int, unsigned int) (ImmersedBoundaryMesh.cpp:152)
==149864==    by 0x15945F: TestImmersedBoundarySimulationModifier::TestPropagateFluidSourcesToGrid() (TestImmersedBoundarySimulationModifier.hpp:381)
==149864==    by 0x164B24: TestDescription_TestImmersedBoundarySimulationModifier_TestPropagateFluidSourcesToGrid::runTest() (TestImmersedBoundarySimulationModifier.cpp:61)
==149864==    by 0x148091: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96)
==149864==    by 0x14BD30: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74)
==149864==    by 0x14BC15: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61)
==149864==    by 0x14BABB: CxxTest::TestRunner::runWorld() (TestRunner.h:46)
==149864==    by 0x14B922: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==149864==    by 0x14BFB9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==149864==    by 0x146DD5: main (TestImmersedBoundarySimulationModifier.cpp:19)
==149864== 
{
   <insert_a_suppression_name_here>
   Memcheck:Leak
   match-leak-kinds: definite
   fun:_Znwm
   fun:_ZN20ImmersedBoundaryMeshILj2ELj2EEC1ESt6vectorIP4NodeILj2EESaIS4_EES1_IP23ImmersedBoundaryElementILj2ELj2EESaIS9_EES1_IPS7_ILj1ELj2EESaISD_EEjj
   fun:_ZN38TestImmersedBoundarySimulationModifier31TestPropagateFluidSourcesToGridEv
   fun:_ZN86TestDescription_TestImmersedBoundarySimulationModifier_TestPropagateFluidSourcesToGrid7runTestEv
   fun:_ZN7CxxTest19RealTestDescription3runEv
   fun:_ZN7CxxTest10TestRunner7runTestERNS_15TestDescriptionE
   fun:_ZN7CxxTest10TestRunner8runSuiteERNS_16SuiteDescriptionE
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==149864== LEAK SUMMARY:
==149864==    definitely lost: 192 bytes in 4 blocks
==149864==    indirectly lost: 0 bytes in 0 blocks
==149864==      possibly lost: 0 bytes in 0 blocks
==149864==    still reachable: 56 bytes in 3 blocks
==149864==         suppressed: 700,698 bytes in 9,375 blocks
==149864== Reachable blocks (those to which a pointer was found) are not shown.
==149864== To see them, rerun with: --leak-check=full --show-leak-kinds=all
==149864== 
==149864== For lists of detected and suppressed errors, rerun with: -s
==149864== ERROR SUMMARY: 4 errors from 4 contexts (suppressed: 37 from 37)