==166030== Memcheck, a memory error detector ==166030== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==166030== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==166030== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestMonodomainProblem -malloc_debug -malloc_dump -memory_info ==166030== Parent PID: 147781 ==166030== ==166030== Warning: invalid file descriptor -1 in syscall close() ==166030== ==166030== FILE DESCRIPTORS: 9 open (3 std) at exit. ==166030== Open file descriptor 12: ==166030== at 0xC0E622D: pipe (pipe.c:29) ==166030== by 0x1430D07D: ??? ==166030== by 0xFFD04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==166030== by 0xB9D4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==166030== by 0xB96DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==166030== by 0xA2AFD38: PetscInitialize (pinit.c:924) ==166030== by 0xA1222DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==166030== by 0xA12232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==166030== by 0x14A2B6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==166030== by 0x14182D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==166030== by 0x144A20: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==166030== by 0x1448C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==166030== by 0x144F57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==166030== by 0x13FC05: main (TestMonodomainProblem.cpp:19) ==166030== ==166030== Open file descriptor 8: /dev/shm/open_mpi.0000 ==166030== at 0xC0EABCC: __open_nocancel (open64_nocancel.c:39) ==166030== by 0xC06EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==166030== by 0xA157822: ??? ==166030== by 0xA15796F: ??? ==166030== by 0x100756DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==166030== by 0x10075938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==166030== by 0x1002B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==166030== by 0xFFD02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==166030== by 0xB9D4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==166030== by 0xB96DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==166030== by 0xA2AFD38: PetscInitialize (pinit.c:924) ==166030== by 0xA1222DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==166030== by 0xA12232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==166030== by 0x14A2B6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==166030== by 0x14182D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==166030== by 0x144A20: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==166030== by 0x1448C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==166030== by 0x144F57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==166030== by 0x13FC05: main (TestMonodomainProblem.cpp:19) ==166030== ==166030== Open file descriptor 115: ==166030== ==166030== ==166030== Open file descriptor 112: ==166030== ==166030== ==166030== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMonodomainProblem_valgrind.txt ==166030== ==166030== ==166030== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==166030== ==166030== ==166030== ==166030== HEAP SUMMARY: ==166030== in use at exit: 701,150 bytes in 9,383 blocks ==166030== total heap usage: 6,620,298 allocs, 6,610,915 frees, 4,033,849,890 bytes allocated ==166030== ==166030== LEAK SUMMARY: ==166030== definitely lost: 0 bytes in 0 blocks ==166030== indirectly lost: 0 bytes in 0 blocks ==166030== possibly lost: 0 bytes in 0 blocks ==166030== still reachable: 24 bytes in 2 blocks ==166030== suppressed: 701,126 bytes in 9,381 blocks ==166030== Reachable blocks (those to which a pointer was found) are not shown. ==166030== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==166030== ==166030== For lists of detected and suppressed errors, rerun with: -s ==166030== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 128 from 34)