==149997== Memcheck, a memory error detector ==149997== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==149997== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==149997== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation3d -malloc_debug -malloc_dump -memory_info ==149997== Parent PID: 147781 ==149997== ==149997== ==149997== FILE DESCRIPTORS: 9 open (3 std) at exit. ==149997== Open file descriptor 12: ==149997== at 0x10EA022D: pipe (pipe.c:29) ==149997== by 0x1977607D: ??? ==149997== by 0x14CF34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==149997== by 0x106C1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==149997== by 0x1065AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==149997== by 0xF351D38: PetscInitialize (pinit.c:924) ==149997== by 0xF1C62DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==149997== by 0xF1C632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==149997== by 0x1FF4E9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==149997== by 0x1F945F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==149997== by 0x1FC774: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==149997== by 0x1FC670: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==149997== by 0x1FCC83: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==149997== by 0x1F7C55: main (TestOffLatticeSimulation3d.cpp:18) ==149997== ==149997== Open file descriptor 8: /dev/shm/open_mpi.0000 ==149997== at 0x10EA4BCC: __open_nocancel (open64_nocancel.c:39) ==149997== by 0x10E28C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==149997== by 0xF1FB822: ??? ==149997== by 0xF1FB96F: ??? ==149997== by 0x14D986DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==149997== by 0x14D98938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==149997== by 0x14D4E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==149997== by 0x14CF32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==149997== by 0x106C1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==149997== by 0x1065AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==149997== by 0xF351D38: PetscInitialize (pinit.c:924) ==149997== by 0xF1C62DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==149997== by 0xF1C632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==149997== by 0x1FF4E9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==149997== by 0x1F945F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==149997== by 0x1FC774: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==149997== by 0x1FC670: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==149997== by 0x1FCC83: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==149997== by 0x1F7C55: main (TestOffLatticeSimulation3d.cpp:18) ==149997== ==149997== Open file descriptor 115: ==149997== ==149997== ==149997== Open file descriptor 112: ==149997== ==149997== ==149997== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation3d_valgrind.txt ==149997== ==149997== ==149997== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==149997== ==149997== ==149997== ==149997== HEAP SUMMARY: ==149997== in use at exit: 700,754 bytes in 9,378 blocks ==149997== total heap usage: 857,103 allocs, 847,725 frees, 1,519,165,999 bytes allocated ==149997== ==149997== LEAK SUMMARY: ==149997== definitely lost: 0 bytes in 0 blocks ==149997== indirectly lost: 0 bytes in 0 blocks ==149997== possibly lost: 0 bytes in 0 blocks ==149997== still reachable: 56 bytes in 3 blocks ==149997== suppressed: 700,698 bytes in 9,375 blocks ==149997== Reachable blocks (those to which a pointer was found) are not shown. ==149997== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==149997== ==149997== For lists of detected and suppressed errors, rerun with: -s ==149997== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)