==150200== Memcheck, a memory error detector ==150200== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==150200== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==150200== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==150200== Parent PID: 147781 ==150200== ==150200== ==150200== FILE DESCRIPTORS: 9 open (3 std) at exit. ==150200== Open file descriptor 12: ==150200== at 0xFD8822D: pipe (pipe.c:29) ==150200== by 0x1977707D: ??? ==150200== by 0x14D7A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==150200== by 0x11647418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==150200== by 0x115E0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==150200== by 0x102D7D38: PetscInitialize (pinit.c:924) ==150200== by 0xF5632DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==150200== by 0xF56332D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==150200== by 0x22552E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==150200== by 0x21EBB1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==150200== by 0x22271C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==150200== by 0x2225BC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==150200== by 0x222C53: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==150200== by 0x21CF95: main (TestOffLatticeSimulationWithPdes.cpp:19) ==150200== ==150200== Open file descriptor 8: /dev/shm/open_mpi.0000 ==150200== at 0xFD8CBCC: __open_nocancel (open64_nocancel.c:39) ==150200== by 0xFD10C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==150200== by 0xF598822: ??? ==150200== by 0xF59896F: ??? ==150200== by 0x14E1F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==150200== by 0x14E1F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==150200== by 0x14DD5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==150200== by 0x14D7A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==150200== by 0x11647418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==150200== by 0x115E0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==150200== by 0x102D7D38: PetscInitialize (pinit.c:924) ==150200== by 0xF5632DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==150200== by 0xF56332D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==150200== by 0x22552E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==150200== by 0x21EBB1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==150200== by 0x22271C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==150200== by 0x2225BC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==150200== by 0x222C53: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==150200== by 0x21CF95: main (TestOffLatticeSimulationWithPdes.cpp:19) ==150200== ==150200== Open file descriptor 115: ==150200== ==150200== ==150200== Open file descriptor 112: ==150200== ==150200== ==150200== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==150200== ==150200== ==150200== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==150200== ==150200== ==150200== ==150200== HEAP SUMMARY: ==150200== in use at exit: 700,686 bytes in 9,374 blocks ==150200== total heap usage: 7,498,204 allocs, 7,488,830 frees, 2,659,706,268 bytes allocated ==150200== ==150200== LEAK SUMMARY: ==150200== definitely lost: 0 bytes in 0 blocks ==150200== indirectly lost: 0 bytes in 0 blocks ==150200== possibly lost: 0 bytes in 0 blocks ==150200== still reachable: 56 bytes in 3 blocks ==150200== suppressed: 700,630 bytes in 9,371 blocks ==150200== Reachable blocks (those to which a pointer was found) are not shown. ==150200== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==150200== ==150200== For lists of detected and suppressed errors, rerun with: -s ==150200== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)