==150633== Memcheck, a memory error detector ==150633== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==150633== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==150633== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==150633== Parent PID: 147781 ==150633== ==150633== ==150633== FILE DESCRIPTORS: 9 open (3 std) at exit. ==150633== Open file descriptor 12: ==150633== at 0xFE6722D: pipe (pipe.c:29) ==150633== by 0x1977607D: ??? ==150633== by 0x14E9D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==150633== by 0x11AC3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==150633== by 0x11A5CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==150633== by 0x10753D38: PetscInitialize (pinit.c:924) ==150633== by 0xF1C62DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==150633== by 0xF1C632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==150633== by 0x1D3482: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==150633== by 0x1CCE19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==150633== by 0x1D05B4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==150633== by 0x1D0454: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==150633== by 0x1D0AEB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==150633== by 0x1CB235: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==150633== ==150633== Open file descriptor 8: /dev/shm/open_mpi.0000 ==150633== at 0xFE6BBCC: __open_nocancel (open64_nocancel.c:39) ==150633== by 0xFDEFC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==150633== by 0xF1FB822: ??? ==150633== by 0xF1FB96F: ??? ==150633== by 0x14F426DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==150633== by 0x14F42938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==150633== by 0x14EF8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==150633== by 0x14E9D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==150633== by 0x11AC3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==150633== by 0x11A5CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==150633== by 0x10753D38: PetscInitialize (pinit.c:924) ==150633== by 0xF1C62DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==150633== by 0xF1C632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==150633== by 0x1D3482: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==150633== by 0x1CCE19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==150633== by 0x1D05B4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==150633== by 0x1D0454: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==150633== by 0x1D0AEB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==150633== by 0x1CB235: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==150633== ==150633== Open file descriptor 115: ==150633== ==150633== ==150633== Open file descriptor 112: ==150633== ==150633== ==150633== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithCaBasedCellPopulation_valgrind.txt ==150633== ==150633== ==150633== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==150633== ==150633== ==150633== ==150633== HEAP SUMMARY: ==150633== in use at exit: 700,686 bytes in 9,374 blocks ==150633== total heap usage: 7,394,152 allocs, 7,384,778 frees, 8,141,142,904 bytes allocated ==150633== ==150633== LEAK SUMMARY: ==150633== definitely lost: 0 bytes in 0 blocks ==150633== indirectly lost: 0 bytes in 0 blocks ==150633== possibly lost: 0 bytes in 0 blocks ==150633== still reachable: 56 bytes in 3 blocks ==150633== suppressed: 700,630 bytes in 9,371 blocks ==150633== Reachable blocks (those to which a pointer was found) are not shown. ==150633== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==150633== ==150633== For lists of detected and suppressed errors, rerun with: -s ==150633== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)