==152309== Memcheck, a memory error detector ==152309== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==152309== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==152309== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==152309== Parent PID: 147781 ==152309== ==152309== ==152309== FILE DESCRIPTORS: 9 open (3 std) at exit. ==152309== Open file descriptor 12: ==152309== at 0xFD4622D: pipe (pipe.c:29) ==152309== by 0x1977707D: ??? ==152309== by 0x14D7A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==152309== by 0x11647418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==152309== by 0x115E0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==152309== by 0x102D7D38: PetscInitialize (pinit.c:924) ==152309== by 0xF5632DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==152309== by 0xF56332D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==152309== by 0x135852: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==152309== by 0x1303E3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==152309== by 0x133068: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==152309== by 0x132F08: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==152309== by 0x13359F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==152309== by 0x12E7D5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==152309== ==152309== Open file descriptor 8: /dev/shm/open_mpi.0000 ==152309== at 0xFD4ABCC: __open_nocancel (open64_nocancel.c:39) ==152309== by 0xFCCEC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==152309== by 0xF598822: ??? ==152309== by 0xF59896F: ??? ==152309== by 0x14E1F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==152309== by 0x14E1F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==152309== by 0x14DD5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==152309== by 0x14D7A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==152309== by 0x11647418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==152309== by 0x115E0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==152309== by 0x102D7D38: PetscInitialize (pinit.c:924) ==152309== by 0xF5632DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==152309== by 0xF56332D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==152309== by 0x135852: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==152309== by 0x1303E3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==152309== by 0x133068: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==152309== by 0x132F08: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==152309== by 0x13359F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==152309== by 0x12E7D5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==152309== ==152309== Open file descriptor 115: ==152309== ==152309== ==152309== Open file descriptor 112: ==152309== ==152309== ==152309== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPdes_valgrind.txt ==152309== ==152309== ==152309== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==152309== ==152309== ==152309== ==152309== HEAP SUMMARY: ==152309== in use at exit: 700,754 bytes in 9,378 blocks ==152309== total heap usage: 2,361,696 allocs, 2,352,318 frees, 1,791,955,432 bytes allocated ==152309== ==152309== LEAK SUMMARY: ==152309== definitely lost: 0 bytes in 0 blocks ==152309== indirectly lost: 0 bytes in 0 blocks ==152309== possibly lost: 0 bytes in 0 blocks ==152309== still reachable: 56 bytes in 3 blocks ==152309== suppressed: 700,698 bytes in 9,375 blocks ==152309== Reachable blocks (those to which a pointer was found) are not shown. ==152309== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==152309== ==152309== For lists of detected and suppressed errors, rerun with: -s ==152309== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)