==164010== Memcheck, a memory error detector ==164010== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==164010== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==164010== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningCryptSimulationsWithMutationsTutorial -malloc_debug -malloc_dump -memory_info ==164010== Parent PID: 147781 ==164010== ==164010== ==164010== FILE DESCRIPTORS: 9 open (3 std) at exit. ==164010== Open file descriptor 12: ==164010== at 0x1263722D: pipe (pipe.c:29) ==164010== by 0x1B43807D: ??? ==164010== by 0x1659C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==164010== by 0x11F3F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==164010== by 0x11ED8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==164010== by 0x10BAFD38: PetscInitialize (pinit.c:924) ==164010== by 0x10A862DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==164010== by 0x10A8632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==164010== by 0x123E51: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==164010== by 0x11F733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==164010== by 0x12199C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==164010== by 0x121898: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==164010== by 0x121EAB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==164010== by 0x11DF35: main (TestRunningCryptSimulationsWithMutationsTutorial.cpp:18) ==164010== ==164010== Open file descriptor 8: /dev/shm/open_mpi.0000 ==164010== at 0x1263BBCC: __open_nocancel (open64_nocancel.c:39) ==164010== by 0x125BFC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==164010== by 0x11E39822: ??? ==164010== by 0x11E3996F: ??? ==164010== by 0x166416DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==164010== by 0x16641938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==164010== by 0x165F7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==164010== by 0x1659C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==164010== by 0x11F3F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==164010== by 0x11ED8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==164010== by 0x10BAFD38: PetscInitialize (pinit.c:924) ==164010== by 0x10A862DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==164010== by 0x10A8632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==164010== by 0x123E51: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==164010== by 0x11F733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==164010== by 0x12199C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==164010== by 0x121898: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==164010== by 0x121EAB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==164010== by 0x11DF35: main (TestRunningCryptSimulationsWithMutationsTutorial.cpp:18) ==164010== ==164010== Open file descriptor 115: ==164010== ==164010== ==164010== Open file descriptor 112: ==164010== ==164010== ==164010== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningCryptSimulationsWithMutationsTutorial_valgrind.txt ==164010== ==164010== ==164010== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==164010== ==164010== ==164010== ==164010== HEAP SUMMARY: ==164010== in use at exit: 700,702 bytes in 9,374 blocks ==164010== total heap usage: 16,188,551 allocs, 16,179,177 frees, 2,845,047,554 bytes allocated ==164010== ==164010== LEAK SUMMARY: ==164010== definitely lost: 0 bytes in 0 blocks ==164010== indirectly lost: 0 bytes in 0 blocks ==164010== possibly lost: 0 bytes in 0 blocks ==164010== still reachable: 56 bytes in 3 blocks ==164010== suppressed: 700,646 bytes in 9,371 blocks ==164010== Reachable blocks (those to which a pointer was found) are not shown. ==164010== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==164010== ==164010== For lists of detected and suppressed errors, rerun with: -s ==164010== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 36)