==163321== Memcheck, a memory error detector ==163321== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==163321== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==163321== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningDeltaNotchSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==163321== Parent PID: 147781 ==163321== ==163321== ==163321== FILE DESCRIPTORS: 9 open (3 std) at exit. ==163321== Open file descriptor 12: ==163321== at 0xF8C022D: pipe (pipe.c:29) ==163321== by 0x1977707D: ??? ==163321== by 0x14D854CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==163321== by 0x11560418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163321== by 0x114F9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163321== by 0x101F0D38: PetscInitialize (pinit.c:924) ==163321== by 0xF1C62DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==163321== by 0xF1C632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==163321== by 0x121CE8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==163321== by 0x11D553: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==163321== by 0x11F870: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==163321== by 0x11F76B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==163321== by 0x11FD7F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==163321== by 0x11BD55: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==163321== ==163321== Open file descriptor 8: /dev/shm/open_mpi.0000 ==163321== at 0xF8C4BCC: __open_nocancel (open64_nocancel.c:39) ==163321== by 0xF848C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==163321== by 0xF1FB822: ??? ==163321== by 0xF1FB96F: ??? ==163321== by 0x14E2A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==163321== by 0x14E2A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==163321== by 0x14DE0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==163321== by 0x14D852DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==163321== by 0x11560418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163321== by 0x114F9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163321== by 0x101F0D38: PetscInitialize (pinit.c:924) ==163321== by 0xF1C62DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==163321== by 0xF1C632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==163321== by 0x121CE8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==163321== by 0x11D553: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==163321== by 0x11F870: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==163321== by 0x11F76B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==163321== by 0x11FD7F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==163321== by 0x11BD55: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==163321== ==163321== Open file descriptor 115: ==163321== ==163321== ==163321== Open file descriptor 112: ==163321== ==163321== ==163321== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningDeltaNotchSimulationsTutorial_valgrind.txt ==163321== ==163321== ==163321== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==163321== ==163321== ==163321== ==163321== HEAP SUMMARY: ==163321== in use at exit: 700,686 bytes in 9,374 blocks ==163321== total heap usage: 5,180,822 allocs, 5,171,448 frees, 1,793,738,368 bytes allocated ==163321== ==163321== LEAK SUMMARY: ==163321== definitely lost: 0 bytes in 0 blocks ==163321== indirectly lost: 0 bytes in 0 blocks ==163321== possibly lost: 0 bytes in 0 blocks ==163321== still reachable: 56 bytes in 3 blocks ==163321== suppressed: 700,630 bytes in 9,371 blocks ==163321== Reachable blocks (those to which a pointer was found) are not shown. ==163321== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==163321== ==163321== For lists of detected and suppressed errors, rerun with: -s ==163321== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)