==164089== Memcheck, a memory error detector ==164089== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==164089== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==164089== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningMeshBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==164089== Parent PID: 147781 ==164089== ==164089== ==164089== FILE DESCRIPTORS: 9 open (3 std) at exit. ==164089== Open file descriptor 12: ==164089== at 0x1263722D: pipe (pipe.c:29) ==164089== by 0x1B43807D: ??? ==164089== by 0x1659C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==164089== by 0x11F3F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==164089== by 0x11ED8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==164089== by 0x10BAFD38: PetscInitialize (pinit.c:924) ==164089== by 0x10A862DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==164089== by 0x10A8632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==164089== by 0x120DC7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==164089== by 0x11C653: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==164089== by 0x11E8EE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==164089== by 0x11E7EA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==164089== by 0x11EDFD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==164089== by 0x11AE55: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==164089== ==164089== Open file descriptor 8: /dev/shm/open_mpi.0000 ==164089== at 0x1263BBCC: __open_nocancel (open64_nocancel.c:39) ==164089== by 0x125BFC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==164089== by 0x11E39822: ??? ==164089== by 0x11E3996F: ??? ==164089== by 0x166416DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==164089== by 0x16641938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==164089== by 0x165F7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==164089== by 0x1659C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==164089== by 0x11F3F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==164089== by 0x11ED8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==164089== by 0x10BAFD38: PetscInitialize (pinit.c:924) ==164089== by 0x10A862DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==164089== by 0x10A8632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==164089== by 0x120DC7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==164089== by 0x11C653: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==164089== by 0x11E8EE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==164089== by 0x11E7EA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==164089== by 0x11EDFD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==164089== by 0x11AE55: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==164089== ==164089== Open file descriptor 115: ==164089== ==164089== ==164089== Open file descriptor 112: ==164089== ==164089== ==164089== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedCryptSimulationsTutorial_valgrind.txt ==164089== ==164089== ==164089== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==164089== ==164089== ==164089== ==164089== HEAP SUMMARY: ==164089== in use at exit: 700,770 bytes in 9,378 blocks ==164089== total heap usage: 1,756,171 allocs, 1,746,793 frees, 1,530,119,364 bytes allocated ==164089== ==164089== LEAK SUMMARY: ==164089== definitely lost: 0 bytes in 0 blocks ==164089== indirectly lost: 0 bytes in 0 blocks ==164089== possibly lost: 0 bytes in 0 blocks ==164089== still reachable: 56 bytes in 3 blocks ==164089== suppressed: 700,714 bytes in 9,375 blocks ==164089== Reachable blocks (those to which a pointer was found) are not shown. ==164089== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==164089== ==164089== For lists of detected and suppressed errors, rerun with: -s ==164089== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)