==163409== Memcheck, a memory error detector ==163409== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==163409== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==163409== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningMeshBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==163409== Parent PID: 147781 ==163409== ==163409== ==163409== FILE DESCRIPTORS: 9 open (3 std) at exit. ==163409== Open file descriptor 12: ==163409== at 0x10D7722D: pipe (pipe.c:29) ==163409== by 0x1977607D: ??? ==163409== by 0x14CF34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==163409== by 0x1067F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163409== by 0x10618D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163409== by 0xF2EFD38: PetscInitialize (pinit.c:924) ==163409== by 0xF1C62DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==163409== by 0xF1C632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==163409== by 0x121289: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==163409== by 0x11C86D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==163409== by 0x11EE5C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==163409== by 0x11ECFC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==163409== by 0x11F393: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==163409== by 0x11AC95: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==163409== ==163409== Open file descriptor 8: /dev/shm/open_mpi.0000 ==163409== at 0x10D7BBCC: __open_nocancel (open64_nocancel.c:39) ==163409== by 0x10CFFC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==163409== by 0x10579822: ??? ==163409== by 0x1057996F: ??? ==163409== by 0x14D986DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==163409== by 0x14D98938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==163409== by 0x14D4E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==163409== by 0x14CF32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==163409== by 0x1067F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163409== by 0x10618D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163409== by 0xF2EFD38: PetscInitialize (pinit.c:924) ==163409== by 0xF1C62DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==163409== by 0xF1C632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==163409== by 0x121289: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==163409== by 0x11C86D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==163409== by 0x11EE5C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==163409== by 0x11ECFC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==163409== by 0x11F393: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==163409== by 0x11AC95: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==163409== ==163409== Open file descriptor 115: ==163409== ==163409== ==163409== Open file descriptor 112: ==163409== ==163409== ==163409== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedSimulationsTutorial_valgrind.txt ==163409== ==163409== ==163409== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==163409== ==163409== ==163409== ==163409== HEAP SUMMARY: ==163409== in use at exit: 700,754 bytes in 9,378 blocks ==163409== total heap usage: 3,340,127 allocs, 3,330,749 frees, 2,282,316,667 bytes allocated ==163409== ==163409== LEAK SUMMARY: ==163409== definitely lost: 0 bytes in 0 blocks ==163409== indirectly lost: 0 bytes in 0 blocks ==163409== possibly lost: 0 bytes in 0 blocks ==163409== still reachable: 56 bytes in 3 blocks ==163409== suppressed: 700,698 bytes in 9,375 blocks ==163409== Reachable blocks (those to which a pointer was found) are not shown. ==163409== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==163409== ==163409== For lists of detected and suppressed errors, rerun with: -s ==163409== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)