==163473== Memcheck, a memory error detector ==163473== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==163473== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==163473== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningTumourSpheroidSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==163473== Parent PID: 147781 ==163473== ==163473== ==163473== FILE DESCRIPTORS: 9 open (3 std) at exit. ==163473== Open file descriptor 12: ==163473== at 0xFC5D22D: pipe (pipe.c:29) ==163473== by 0x1977707D: ??? ==163473== by 0x14D7A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==163473== by 0x11560418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163473== by 0x114F9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163473== by 0x101EED38: PetscInitialize (pinit.c:924) ==163473== by 0xF5632DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==163473== by 0xF56332D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==163473== by 0x11BA12: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==163473== by 0x117333: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==163473== by 0x11961E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==163473== by 0x119519: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==163473== by 0x119B2D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==163473== by 0x115B35: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==163473== ==163473== Open file descriptor 8: /dev/shm/open_mpi.0000 ==163473== at 0xFC61BCC: __open_nocancel (open64_nocancel.c:39) ==163473== by 0xFBE5C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==163473== by 0xF598822: ??? ==163473== by 0xF59896F: ??? ==163473== by 0x14E1F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==163473== by 0x14E1F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==163473== by 0x14DD5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==163473== by 0x14D7A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==163473== by 0x11560418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163473== by 0x114F9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163473== by 0x101EED38: PetscInitialize (pinit.c:924) ==163473== by 0xF5632DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==163473== by 0xF56332D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==163473== by 0x11BA12: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==163473== by 0x117333: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==163473== by 0x11961E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==163473== by 0x119519: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==163473== by 0x119B2D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==163473== by 0x115B35: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==163473== ==163473== Open file descriptor 115: ==163473== ==163473== ==163473== Open file descriptor 112: ==163473== ==163473== ==163473== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningTumourSpheroidSimulationsTutorial_valgrind.txt ==163473== ==163473== ==163473== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==163473== ==163473== ==163473== ==163473== HEAP SUMMARY: ==163473== in use at exit: 700,754 bytes in 9,378 blocks ==163473== total heap usage: 2,088,330 allocs, 2,078,952 frees, 1,690,284,818 bytes allocated ==163473== ==163473== LEAK SUMMARY: ==163473== definitely lost: 0 bytes in 0 blocks ==163473== indirectly lost: 0 bytes in 0 blocks ==163473== possibly lost: 0 bytes in 0 blocks ==163473== still reachable: 56 bytes in 3 blocks ==163473== suppressed: 700,698 bytes in 9,375 blocks ==163473== Reachable blocks (those to which a pointer was found) are not shown. ==163473== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==163473== ==163473== For lists of detected and suppressed errors, rerun with: -s ==163473== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 38 from 38)