==163488== Memcheck, a memory error detector ==163488== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==163488== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==163488== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningVertexBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==163488== Parent PID: 147781 ==163488== ==163488== ==163488== FILE DESCRIPTORS: 9 open (3 std) at exit. ==163488== Open file descriptor 12: ==163488== at 0x10E5E22D: pipe (pipe.c:29) ==163488== by 0x1977607D: ??? ==163488== by 0x14CF34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==163488== by 0x1067F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163488== by 0x10618D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163488== by 0xF2EFD38: PetscInitialize (pinit.c:924) ==163488== by 0xF1C62DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==163488== by 0xF1C632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==163488== by 0x1298C5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==163488== by 0x124A6D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==163488== by 0x1270EA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==163488== by 0x126F8A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==163488== by 0x127621: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==163488== by 0x122E95: main (TestRunningVertexBasedSimulationsTutorial.cpp:19) ==163488== ==163488== Open file descriptor 8: /dev/shm/open_mpi.0000 ==163488== at 0x10E62BCC: __open_nocancel (open64_nocancel.c:39) ==163488== by 0x10DE6C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==163488== by 0x10579822: ??? ==163488== by 0x1057996F: ??? ==163488== by 0x14D986DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==163488== by 0x14D98938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==163488== by 0x14D4E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==163488== by 0x14CF32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==163488== by 0x1067F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163488== by 0x10618D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163488== by 0xF2EFD38: PetscInitialize (pinit.c:924) ==163488== by 0xF1C62DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==163488== by 0xF1C632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==163488== by 0x1298C5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==163488== by 0x124A6D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==163488== by 0x1270EA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==163488== by 0x126F8A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==163488== by 0x127621: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==163488== by 0x122E95: main (TestRunningVertexBasedSimulationsTutorial.cpp:19) ==163488== ==163488== Open file descriptor 115: ==163488== ==163488== ==163488== Open file descriptor 112: ==163488== ==163488== ==163488== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningVertexBasedSimulationsTutorial_valgrind.txt ==163488== ==163488== ==163488== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==163488== ==163488== ==163488== ==163488== HEAP SUMMARY: ==163488== in use at exit: 700,754 bytes in 9,378 blocks ==163488== total heap usage: 1,401,698 allocs, 1,392,320 frees, 1,413,629,340 bytes allocated ==163488== ==163488== LEAK SUMMARY: ==163488== definitely lost: 0 bytes in 0 blocks ==163488== indirectly lost: 0 bytes in 0 blocks ==163488== possibly lost: 0 bytes in 0 blocks ==163488== still reachable: 56 bytes in 3 blocks ==163488== suppressed: 700,698 bytes in 9,375 blocks ==163488== Reachable blocks (those to which a pointer was found) are not shown. ==163488== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==163488== ==163488== For lists of detected and suppressed errors, rerun with: -s ==163488== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)