==248111== Memcheck, a memory error detector ==248111== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==248111== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==248111== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestMonodomainProblem -malloc_debug -malloc_dump -memory_info ==248111== Parent PID: 229766 ==248111== ==248111== Warning: invalid file descriptor -1 in syscall close() ==248111== ==248111== FILE DESCRIPTORS: 9 open (3 std) at exit. ==248111== Open file descriptor 12: ==248111== at 0xC0E722D: pipe (pipe.c:29) ==248111== by 0x1430D07D: ??? ==248111== by 0xFFD04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==248111== by 0xB9D5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==248111== by 0xB96ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==248111== by 0xA2B0D38: PetscInitialize (pinit.c:924) ==248111== by 0xA1232DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==248111== by 0xA12332D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==248111== by 0x14A2B6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==248111== by 0x14182D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==248111== by 0x144A20: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==248111== by 0x1448C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==248111== by 0x144F57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==248111== by 0x13FC05: main (TestMonodomainProblem.cpp:19) ==248111== ==248111== Open file descriptor 8: /dev/shm/open_mpi.0000 ==248111== at 0xC0EBBCC: __open_nocancel (open64_nocancel.c:39) ==248111== by 0xC06FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==248111== by 0xA158822: ??? ==248111== by 0xA15896F: ??? ==248111== by 0x100756DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==248111== by 0x10075938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==248111== by 0x1002B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==248111== by 0xFFD02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==248111== by 0xB9D5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==248111== by 0xB96ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==248111== by 0xA2B0D38: PetscInitialize (pinit.c:924) ==248111== by 0xA1232DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==248111== by 0xA12332D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==248111== by 0x14A2B6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==248111== by 0x14182D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==248111== by 0x144A20: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==248111== by 0x1448C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==248111== by 0x144F57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==248111== by 0x13FC05: main (TestMonodomainProblem.cpp:19) ==248111== ==248111== Open file descriptor 115: ==248111== ==248111== ==248111== Open file descriptor 112: ==248111== ==248111== ==248111== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMonodomainProblem_valgrind.txt ==248111== ==248111== ==248111== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==248111== ==248111== ==248111== ==248111== HEAP SUMMARY: ==248111== in use at exit: 701,150 bytes in 9,383 blocks ==248111== total heap usage: 6,620,460 allocs, 6,611,077 frees, 4,033,896,932 bytes allocated ==248111== ==248111== LEAK SUMMARY: ==248111== definitely lost: 0 bytes in 0 blocks ==248111== indirectly lost: 0 bytes in 0 blocks ==248111== possibly lost: 0 bytes in 0 blocks ==248111== still reachable: 24 bytes in 2 blocks ==248111== suppressed: 701,126 bytes in 9,381 blocks ==248111== Reachable blocks (those to which a pointer was found) are not shown. ==248111== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==248111== ==248111== For lists of detected and suppressed errors, rerun with: -s ==248111== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 128 from 34)