==231671== Memcheck, a memory error detector ==231671== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==231671== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==231671== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithBuskeUpdate -malloc_debug -malloc_dump -memory_info ==231671== Parent PID: 229766 ==231671== ==231671== ==231671== FILE DESCRIPTORS: 9 open (3 std) at exit. ==231671== Open file descriptor 12: ==231671== at 0xF90322D: pipe (pipe.c:29) ==231671== by 0x1977707D: ??? ==231671== by 0x14D854CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==231671== by 0x11561418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==231671== by 0x114FAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==231671== by 0x101EFD38: PetscInitialize (pinit.c:924) ==231671== by 0xF1C72DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==231671== by 0xF1C732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==231671== by 0x2CC5B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==231671== by 0x2C3A9F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==231671== by 0x2C7EB8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==231671== by 0x2C7DB3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==231671== by 0x2C83C7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==231671== by 0x2C2295: main (TestNodeBasedCellPopulationWithBuskeUpdate.cpp:18) ==231671== ==231671== Open file descriptor 8: /dev/shm/open_mpi.0000 ==231671== at 0xF907BCC: __open_nocancel (open64_nocancel.c:39) ==231671== by 0xF88BC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==231671== by 0xF1FC822: ??? ==231671== by 0xF1FC96F: ??? ==231671== by 0x14E2A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==231671== by 0x14E2A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==231671== by 0x14DE0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==231671== by 0x14D852DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==231671== by 0x11561418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==231671== by 0x114FAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==231671== by 0x101EFD38: PetscInitialize (pinit.c:924) ==231671== by 0xF1C72DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==231671== by 0xF1C732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==231671== by 0x2CC5B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==231671== by 0x2C3A9F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==231671== by 0x2C7EB8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==231671== by 0x2C7DB3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==231671== by 0x2C83C7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==231671== by 0x2C2295: main (TestNodeBasedCellPopulationWithBuskeUpdate.cpp:18) ==231671== ==231671== Open file descriptor 115: ==231671== ==231671== ==231671== Open file descriptor 112: ==231671== ==231671== ==231671== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithBuskeUpdate_valgrind.txt ==231671== ==231671== ==231671== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==231671== ==231671== ==231671== ==231671== HEAP SUMMARY: ==231671== in use at exit: 700,754 bytes in 9,378 blocks ==231671== total heap usage: 59,315 allocs, 49,937 frees, 1,355,293,035 bytes allocated ==231671== ==231671== LEAK SUMMARY: ==231671== definitely lost: 0 bytes in 0 blocks ==231671== indirectly lost: 0 bytes in 0 blocks ==231671== possibly lost: 0 bytes in 0 blocks ==231671== still reachable: 56 bytes in 3 blocks ==231671== suppressed: 700,698 bytes in 9,375 blocks ==231671== Reachable blocks (those to which a pointer was found) are not shown. ==231671== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==231671== ==231671== For lists of detected and suppressed errors, rerun with: -s ==231671== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)