==232416== Memcheck, a memory error detector ==232416== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==232416== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==232416== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==232416== Parent PID: 229766 ==232416== ==232416== ==232416== FILE DESCRIPTORS: 9 open (3 std) at exit. ==232416== Open file descriptor 12: ==232416== at 0x10EA122D: pipe (pipe.c:29) ==232416== by 0x1977807D: ??? ==232416== by 0x14CF34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==232416== by 0x106C2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==232416== by 0x1065BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==232416== by 0xF352D38: PetscInitialize (pinit.c:924) ==232416== by 0xF1C72DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==232416== by 0xF1C732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==232416== by 0x1FFF0B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==232416== by 0x1F9AD9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==232416== by 0x1FD444: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==232416== by 0x1FD2E4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==232416== by 0x1FD97B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==232416== by 0x1F7EF5: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==232416== ==232416== Open file descriptor 8: /dev/shm/open_mpi.0000 ==232416== at 0x10EA5BCC: __open_nocancel (open64_nocancel.c:39) ==232416== by 0x10E29C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==232416== by 0xF1FC822: ??? ==232416== by 0xF1FC96F: ??? ==232416== by 0x14D986DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==232416== by 0x14D98938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==232416== by 0x14D4E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==232416== by 0x14CF32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==232416== by 0x106C2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==232416== by 0x1065BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==232416== by 0xF352D38: PetscInitialize (pinit.c:924) ==232416== by 0xF1C72DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==232416== by 0xF1C732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==232416== by 0x1FFF0B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==232416== by 0x1F9AD9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==232416== by 0x1FD444: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==232416== by 0x1FD2E4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==232416== by 0x1FD97B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==232416== by 0x1F7EF5: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==232416== ==232416== Open file descriptor 115: ==232416== ==232416== ==232416== Open file descriptor 112: ==232416== ==232416== ==232416== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithVertexBasedCellPopulation_valgrind.txt ==232416== ==232416== ==232416== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==232416== ==232416== ==232416== ==232416== HEAP SUMMARY: ==232416== in use at exit: 700,686 bytes in 9,374 blocks ==232416== total heap usage: 9,749,879 allocs, 9,740,505 frees, 2,617,650,880 bytes allocated ==232416== ==232416== LEAK SUMMARY: ==232416== definitely lost: 0 bytes in 0 blocks ==232416== indirectly lost: 0 bytes in 0 blocks ==232416== possibly lost: 0 bytes in 0 blocks ==232416== still reachable: 56 bytes in 3 blocks ==232416== suppressed: 700,630 bytes in 9,371 blocks ==232416== Reachable blocks (those to which a pointer was found) are not shown. ==232416== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==232416== ==232416== For lists of detected and suppressed errors, rerun with: -s ==232416== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)