==307409== Memcheck, a memory error detector ==307409== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==307409== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==307409== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==307409== Parent PID: 291395 ==307409== ==307409== ==307409== FILE DESCRIPTORS: 9 open (3 std) at exit. ==307409== Open file descriptor 12: ==307409== at 0x1259022D: pipe (pipe.c:29) ==307409== by 0x1B34F07D: ??? ==307409== by 0x164B34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==307409== by 0x11E98418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==307409== by 0x11E31D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==307409== by 0x10B28D38: PetscInitialize (pinit.c:924) ==307409== by 0x1099D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==307409== by 0x1099D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==307409== by 0x22445D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==307409== by 0x21BE99: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==307409== by 0x21FAA0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==307409== by 0x21F940: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==307409== by 0x21FFD7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==307409== by 0x21A2B5: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==307409== ==307409== Open file descriptor 8: /dev/shm/open_mpi.0000 ==307409== at 0x12594BCC: __open_nocancel (open64_nocancel.c:39) ==307409== by 0x12518C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==307409== by 0x109D2822: ??? ==307409== by 0x109D296F: ??? ==307409== by 0x165586DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==307409== by 0x16558938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==307409== by 0x1650E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==307409== by 0x164B32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==307409== by 0x11E98418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==307409== by 0x11E31D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==307409== by 0x10B28D38: PetscInitialize (pinit.c:924) ==307409== by 0x1099D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==307409== by 0x1099D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==307409== by 0x22445D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==307409== by 0x21BE99: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==307409== by 0x21FAA0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==307409== by 0x21F940: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==307409== by 0x21FFD7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==307409== by 0x21A2B5: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==307409== ==307409== Open file descriptor 115: ==307409== ==307409== ==307409== Open file descriptor 112: ==307409== ==307409== ==307409== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithVertexBasedCellPopulation_valgrind.txt ==307409== ==307409== ==307409== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==307409== ==307409== ==307409== ==307409== HEAP SUMMARY: ==307409== in use at exit: 700,702 bytes in 9,374 blocks ==307409== total heap usage: 3,720,505 allocs, 3,711,131 frees, 1,636,755,042 bytes allocated ==307409== ==307409== LEAK SUMMARY: ==307409== definitely lost: 0 bytes in 0 blocks ==307409== indirectly lost: 0 bytes in 0 blocks ==307409== possibly lost: 0 bytes in 0 blocks ==307409== still reachable: 56 bytes in 3 blocks ==307409== suppressed: 700,646 bytes in 9,371 blocks ==307409== Reachable blocks (those to which a pointer was found) are not shown. ==307409== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==307409== ==307409== For lists of detected and suppressed errors, rerun with: -s ==307409== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)