==293616== Memcheck, a memory error detector ==293616== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==293616== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==293616== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation -malloc_debug -malloc_dump -memory_info ==293616== Parent PID: 291395 ==293616== ==293616== ==293616== FILE DESCRIPTORS: 9 open (3 std) at exit. ==293616== Open file descriptor 12: ==293616== at 0xF90222D: pipe (pipe.c:29) ==293616== by 0x1968D07D: ??? ==293616== by 0x14C904CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==293616== by 0x1155E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==293616== by 0x114F7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==293616== by 0x101EED38: PetscInitialize (pinit.c:924) ==293616== by 0xF0DD2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==293616== by 0xF0DD32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==293616== by 0x31150E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==293616== by 0x307B19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==293616== by 0x30BF20: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==293616== by 0x30BDC0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==293616== by 0x30C457: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==293616== by 0x305F35: main (TestOffLatticeSimulation.cpp:19) ==293616== ==293616== Open file descriptor 8: /dev/shm/open_mpi.0000 ==293616== at 0xF906BCC: __open_nocancel (open64_nocancel.c:39) ==293616== by 0xF88AC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==293616== by 0xF112822: ??? ==293616== by 0xF11296F: ??? ==293616== by 0x14D356DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==293616== by 0x14D35938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==293616== by 0x14CEB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==293616== by 0x14C902DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==293616== by 0x1155E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==293616== by 0x114F7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==293616== by 0x101EED38: PetscInitialize (pinit.c:924) ==293616== by 0xF0DD2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==293616== by 0xF0DD32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==293616== by 0x31150E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==293616== by 0x307B19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==293616== by 0x30BF20: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==293616== by 0x30BDC0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==293616== by 0x30C457: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==293616== by 0x305F35: main (TestOffLatticeSimulation.cpp:19) ==293616== ==293616== Open file descriptor 115: ==293616== ==293616== ==293616== Open file descriptor 112: ==293616== ==293616== ==293616== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation_valgrind.txt ==293616== ==293616== ==293616== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==293616== ==293616== ==293616== ==293616== HEAP SUMMARY: ==293616== in use at exit: 700,686 bytes in 9,374 blocks ==293616== total heap usage: 12,851,725 allocs, 12,842,351 frees, 3,876,797,698 bytes allocated ==293616== ==293616== LEAK SUMMARY: ==293616== definitely lost: 0 bytes in 0 blocks ==293616== indirectly lost: 0 bytes in 0 blocks ==293616== possibly lost: 0 bytes in 0 blocks ==293616== still reachable: 56 bytes in 3 blocks ==293616== suppressed: 700,630 bytes in 9,371 blocks ==293616== Reachable blocks (those to which a pointer was found) are not shown. ==293616== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==293616== ==293616== For lists of detected and suppressed errors, rerun with: -s ==293616== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)