==296036== Memcheck, a memory error detector ==296036== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==296036== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==296036== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==296036== Parent PID: 291395 ==296036== ==296036== ==296036== FILE DESCRIPTORS: 9 open (3 std) at exit. ==296036== Open file descriptor 12: ==296036== at 0xFC5D22D: pipe (pipe.c:29) ==296036== by 0x1968D07D: ??? ==296036== by 0x14C964CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==296036== by 0x1155E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==296036== by 0x114F7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==296036== by 0x101EED38: PetscInitialize (pinit.c:924) ==296036== by 0xF47A2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==296036== by 0xF47A32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==296036== by 0x135852: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==296036== by 0x1303E3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==296036== by 0x133068: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==296036== by 0x132F08: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==296036== by 0x13359F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==296036== by 0x12E7D5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==296036== ==296036== Open file descriptor 8: /dev/shm/open_mpi.0000 ==296036== at 0xFC61BCC: __open_nocancel (open64_nocancel.c:39) ==296036== by 0xFBE5C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==296036== by 0xF4AF822: ??? ==296036== by 0xF4AF96F: ??? ==296036== by 0x14D3B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==296036== by 0x14D3B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==296036== by 0x14CF1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==296036== by 0x14C962DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==296036== by 0x1155E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==296036== by 0x114F7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==296036== by 0x101EED38: PetscInitialize (pinit.c:924) ==296036== by 0xF47A2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==296036== by 0xF47A32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==296036== by 0x135852: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==296036== by 0x1303E3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==296036== by 0x133068: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==296036== by 0x132F08: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==296036== by 0x13359F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==296036== by 0x12E7D5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==296036== ==296036== Open file descriptor 115: ==296036== ==296036== ==296036== Open file descriptor 112: ==296036== ==296036== ==296036== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPdes_valgrind.txt ==296036== ==296036== ==296036== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==296036== ==296036== ==296036== ==296036== HEAP SUMMARY: ==296036== in use at exit: 700,754 bytes in 9,378 blocks ==296036== total heap usage: 2,359,055 allocs, 2,349,677 frees, 1,791,565,514 bytes allocated ==296036== ==296036== LEAK SUMMARY: ==296036== definitely lost: 0 bytes in 0 blocks ==296036== indirectly lost: 0 bytes in 0 blocks ==296036== possibly lost: 0 bytes in 0 blocks ==296036== still reachable: 56 bytes in 3 blocks ==296036== suppressed: 700,698 bytes in 9,375 blocks ==296036== Reachable blocks (those to which a pointer was found) are not shown. ==296036== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==296036== ==296036== For lists of detected and suppressed errors, rerun with: -s ==296036== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)