==307642== Memcheck, a memory error detector ==307642== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==307642== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==307642== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningCryptSimulationsWithMutationsTutorial -malloc_debug -malloc_dump -memory_info ==307642== Parent PID: 291395 ==307642== ==307642== ==307642== FILE DESCRIPTORS: 9 open (3 std) at exit. ==307642== Open file descriptor 12: ==307642== at 0x1254E22D: pipe (pipe.c:29) ==307642== by 0x1B34F07D: ??? ==307642== by 0x164B34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==307642== by 0x11E56418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==307642== by 0x11DEFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==307642== by 0x10AC6D38: PetscInitialize (pinit.c:924) ==307642== by 0x1099D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==307642== by 0x1099D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==307642== by 0x123E51: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==307642== by 0x11F733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==307642== by 0x12199C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==307642== by 0x121898: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==307642== by 0x121EAB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==307642== by 0x11DF35: main (TestRunningCryptSimulationsWithMutationsTutorial.cpp:18) ==307642== ==307642== Open file descriptor 8: /dev/shm/open_mpi.0000 ==307642== at 0x12552BCC: __open_nocancel (open64_nocancel.c:39) ==307642== by 0x124D6C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==307642== by 0x11D50822: ??? ==307642== by 0x11D5096F: ??? ==307642== by 0x165586DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==307642== by 0x16558938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==307642== by 0x1650E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==307642== by 0x164B32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==307642== by 0x11E56418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==307642== by 0x11DEFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==307642== by 0x10AC6D38: PetscInitialize (pinit.c:924) ==307642== by 0x1099D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==307642== by 0x1099D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==307642== by 0x123E51: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==307642== by 0x11F733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==307642== by 0x12199C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==307642== by 0x121898: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==307642== by 0x121EAB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==307642== by 0x11DF35: main (TestRunningCryptSimulationsWithMutationsTutorial.cpp:18) ==307642== ==307642== Open file descriptor 115: ==307642== ==307642== ==307642== Open file descriptor 112: ==307642== ==307642== ==307642== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningCryptSimulationsWithMutationsTutorial_valgrind.txt ==307642== ==307642== ==307642== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==307642== ==307642== ==307642== ==307642== HEAP SUMMARY: ==307642== in use at exit: 700,702 bytes in 9,374 blocks ==307642== total heap usage: 16,188,495 allocs, 16,179,121 frees, 2,845,043,262 bytes allocated ==307642== ==307642== LEAK SUMMARY: ==307642== definitely lost: 0 bytes in 0 blocks ==307642== indirectly lost: 0 bytes in 0 blocks ==307642== possibly lost: 0 bytes in 0 blocks ==307642== still reachable: 56 bytes in 3 blocks ==307642== suppressed: 700,646 bytes in 9,371 blocks ==307642== Reachable blocks (those to which a pointer was found) are not shown. ==307642== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==307642== ==307642== For lists of detected and suppressed errors, rerun with: -s ==307642== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)