==307729== Memcheck, a memory error detector ==307729== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==307729== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==307729== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningMeshBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==307729== Parent PID: 291395 ==307729== ==307729== ==307729== FILE DESCRIPTORS: 9 open (3 std) at exit. ==307729== Open file descriptor 12: ==307729== at 0x1254E22D: pipe (pipe.c:29) ==307729== by 0x1B34F07D: ??? ==307729== by 0x164B34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==307729== by 0x11E56418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==307729== by 0x11DEFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==307729== by 0x10AC6D38: PetscInitialize (pinit.c:924) ==307729== by 0x1099D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==307729== by 0x1099D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==307729== by 0x120DC7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==307729== by 0x11C653: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==307729== by 0x11E8EE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==307729== by 0x11E7EA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==307729== by 0x11EDFD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==307729== by 0x11AE55: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==307729== ==307729== Open file descriptor 8: /dev/shm/open_mpi.0000 ==307729== at 0x12552BCC: __open_nocancel (open64_nocancel.c:39) ==307729== by 0x124D6C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==307729== by 0x11D50822: ??? ==307729== by 0x11D5096F: ??? ==307729== by 0x165586DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==307729== by 0x16558938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==307729== by 0x1650E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==307729== by 0x164B32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==307729== by 0x11E56418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==307729== by 0x11DEFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==307729== by 0x10AC6D38: PetscInitialize (pinit.c:924) ==307729== by 0x1099D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==307729== by 0x1099D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==307729== by 0x120DC7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==307729== by 0x11C653: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==307729== by 0x11E8EE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==307729== by 0x11E7EA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==307729== by 0x11EDFD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==307729== by 0x11AE55: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==307729== ==307729== Open file descriptor 115: ==307729== ==307729== ==307729== Open file descriptor 112: ==307729== ==307729== ==307729== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedCryptSimulationsTutorial_valgrind.txt ==307729== ==307729== ==307729== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==307729== ==307729== ==307729== ==307729== HEAP SUMMARY: ==307729== in use at exit: 700,770 bytes in 9,378 blocks ==307729== total heap usage: 1,756,115 allocs, 1,746,737 frees, 1,530,114,331 bytes allocated ==307729== ==307729== LEAK SUMMARY: ==307729== definitely lost: 0 bytes in 0 blocks ==307729== indirectly lost: 0 bytes in 0 blocks ==307729== possibly lost: 0 bytes in 0 blocks ==307729== still reachable: 56 bytes in 3 blocks ==307729== suppressed: 700,714 bytes in 9,375 blocks ==307729== Reachable blocks (those to which a pointer was found) are not shown. ==307729== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==307729== ==307729== For lists of detected and suppressed errors, rerun with: -s ==307729== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)