==307126== Memcheck, a memory error detector ==307126== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==307126== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==307126== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningVertexBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==307126== Parent PID: 291395 ==307126== ==307126== ==307126== FILE DESCRIPTORS: 9 open (3 std) at exit. ==307126== Open file descriptor 12: ==307126== at 0x10D7522D: pipe (pipe.c:29) ==307126== by 0x1968D07D: ??? ==307126== by 0x14BF04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==307126== by 0x10596418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==307126== by 0x1052FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==307126== by 0xF206D38: PetscInitialize (pinit.c:924) ==307126== by 0xF0DD2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==307126== by 0xF0DD32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==307126== by 0x1298C5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==307126== by 0x124A6D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==307126== by 0x1270EA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==307126== by 0x126F8A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==307126== by 0x127621: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==307126== by 0x122E95: main (TestRunningVertexBasedSimulationsTutorial.cpp:19) ==307126== ==307126== Open file descriptor 8: /dev/shm/open_mpi.0000 ==307126== at 0x10D79BCC: __open_nocancel (open64_nocancel.c:39) ==307126== by 0x10CFDC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==307126== by 0x10490822: ??? ==307126== by 0x1049096F: ??? ==307126== by 0x14C956DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==307126== by 0x14C95938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==307126== by 0x14C4B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==307126== by 0x14BF02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==307126== by 0x10596418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==307126== by 0x1052FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==307126== by 0xF206D38: PetscInitialize (pinit.c:924) ==307126== by 0xF0DD2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==307126== by 0xF0DD32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==307126== by 0x1298C5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==307126== by 0x124A6D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==307126== by 0x1270EA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==307126== by 0x126F8A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==307126== by 0x127621: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==307126== by 0x122E95: main (TestRunningVertexBasedSimulationsTutorial.cpp:19) ==307126== ==307126== Open file descriptor 115: ==307126== ==307126== ==307126== Open file descriptor 112: ==307126== ==307126== ==307126== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningVertexBasedSimulationsTutorial_valgrind.txt ==307126== ==307126== ==307126== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==307126== ==307126== ==307126== ==307126== HEAP SUMMARY: ==307126== in use at exit: 700,754 bytes in 9,378 blocks ==307126== total heap usage: 1,401,641 allocs, 1,392,263 frees, 1,413,623,878 bytes allocated ==307126== ==307126== LEAK SUMMARY: ==307126== definitely lost: 0 bytes in 0 blocks ==307126== indirectly lost: 0 bytes in 0 blocks ==307126== possibly lost: 0 bytes in 0 blocks ==307126== still reachable: 56 bytes in 3 blocks ==307126== suppressed: 700,698 bytes in 9,375 blocks ==307126== Reachable blocks (those to which a pointer was found) are not shown. ==307126== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==307126== ==307126== For lists of detected and suppressed errors, rerun with: -s ==307126== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)