==436058== Memcheck, a memory error detector ==436058== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==436058== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==436058== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithParticles -malloc_debug -malloc_dump -memory_info ==436058== Parent PID: 434199 ==436058== ==436058== ==436058== FILE DESCRIPTORS: 9 open (3 std) at exit. ==436058== Open file descriptor 12: ==436058== at 0xF90222D: pipe (pipe.c:29) ==436058== by 0x1968D07D: ??? ==436058== by 0x14C904CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==436058== by 0x1155E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==436058== by 0x114F7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==436058== by 0x101EED38: PetscInitialize (pinit.c:924) ==436058== by 0xF0DD2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==436058== by 0xF0DD32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==436058== by 0x2E2C1A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==436058== by 0x2D9439: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==436058== by 0x2DDE04: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==436058== by 0x2DDCA4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==436058== by 0x2DE33B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==436058== by 0x2D7855: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==436058== ==436058== Open file descriptor 8: /dev/shm/open_mpi.0000 ==436058== at 0xF906BCC: __open_nocancel (open64_nocancel.c:39) ==436058== by 0xF88AC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==436058== by 0xF112822: ??? ==436058== by 0xF11296F: ??? ==436058== by 0x14D356DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==436058== by 0x14D35938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==436058== by 0x14CEB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==436058== by 0x14C902DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==436058== by 0x1155E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==436058== by 0x114F7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==436058== by 0x101EED38: PetscInitialize (pinit.c:924) ==436058== by 0xF0DD2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==436058== by 0xF0DD32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==436058== by 0x2E2C1A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==436058== by 0x2D9439: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==436058== by 0x2DDE04: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==436058== by 0x2DDCA4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==436058== by 0x2DE33B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==436058== by 0x2D7855: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==436058== ==436058== Open file descriptor 115: ==436058== ==436058== ==436058== Open file descriptor 112: ==436058== ==436058== ==436058== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithParticles_valgrind.txt ==436058== ==436058== ==436058== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==436058== ==436058== ==436058== ==436058== HEAP SUMMARY: ==436058== in use at exit: 700,754 bytes in 9,378 blocks ==436058== total heap usage: 105,863 allocs, 96,485 frees, 1,361,289,066 bytes allocated ==436058== ==436058== LEAK SUMMARY: ==436058== definitely lost: 0 bytes in 0 blocks ==436058== indirectly lost: 0 bytes in 0 blocks ==436058== possibly lost: 0 bytes in 0 blocks ==436058== still reachable: 56 bytes in 3 blocks ==436058== suppressed: 700,698 bytes in 9,375 blocks ==436058== Reachable blocks (those to which a pointer was found) are not shown. ==436058== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==436058== ==436058== For lists of detected and suppressed errors, rerun with: -s ==436058== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)