==450000== Memcheck, a memory error detector ==450000== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==450000== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==450000== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOdeBasedCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==450000== Parent PID: 434199 ==450000== ==450000== ==450000== FILE DESCRIPTORS: 9 open (3 std) at exit. ==450000== Open file descriptor 12: ==450000== at 0x10B9122D: pipe (pipe.c:29) ==450000== by 0x1B35007D: ??? ==450000== by 0x154F14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==450000== by 0x10499418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==450000== by 0x10432D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==450000== by 0xF129D38: PetscInitialize (pinit.c:924) ==450000== by 0xEF9E2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==450000== by 0xEF9E32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==450000== by 0x192669: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==450000== by 0x18A60B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==450000== by 0x18DC08: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==450000== by 0x18DAA8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==450000== by 0x18E13F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==450000== by 0x186F35: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==450000== ==450000== Open file descriptor 8: /dev/shm/open_mpi.0000 ==450000== at 0x10B95BCC: __open_nocancel (open64_nocancel.c:39) ==450000== by 0x10B19C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==450000== by 0xEFD3822: ??? ==450000== by 0xEFD396F: ??? ==450000== by 0x155966DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==450000== by 0x15596938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==450000== by 0x1554C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==450000== by 0x154F12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==450000== by 0x10499418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==450000== by 0x10432D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==450000== by 0xF129D38: PetscInitialize (pinit.c:924) ==450000== by 0xEF9E2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==450000== by 0xEF9E32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==450000== by 0x192669: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==450000== by 0x18A60B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==450000== by 0x18DC08: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==450000== by 0x18DAA8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==450000== by 0x18E13F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==450000== by 0x186F35: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==450000== ==450000== Open file descriptor 115: ==450000== ==450000== ==450000== Open file descriptor 112: ==450000== ==450000== ==450000== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModelsForCrypt_valgrind.txt ==450000== ==450000== ==450000== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==450000== ==450000== ==450000== ==450000== HEAP SUMMARY: ==450000== in use at exit: 700,834 bytes in 9,379 blocks ==450000== total heap usage: 864,280 allocs, 854,901 frees, 1,475,989,513 bytes allocated ==450000== ==450000== LEAK SUMMARY: ==450000== definitely lost: 0 bytes in 0 blocks ==450000== indirectly lost: 0 bytes in 0 blocks ==450000== possibly lost: 0 bytes in 0 blocks ==450000== still reachable: 120 bytes in 4 blocks ==450000== suppressed: 700,714 bytes in 9,375 blocks ==450000== Reachable blocks (those to which a pointer was found) are not shown. ==450000== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==450000== ==450000== For lists of detected and suppressed errors, rerun with: -s ==450000== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)