==436418== Memcheck, a memory error detector ==436418== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==436418== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==436418== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation -malloc_debug -malloc_dump -memory_info ==436418== Parent PID: 434199 ==436418== ==436418== ==436418== FILE DESCRIPTORS: 9 open (3 std) at exit. ==436418== Open file descriptor 12: ==436418== at 0xF90222D: pipe (pipe.c:29) ==436418== by 0x1968D07D: ??? ==436418== by 0x14C904CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==436418== by 0x1155E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==436418== by 0x114F7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==436418== by 0x101EED38: PetscInitialize (pinit.c:924) ==436418== by 0xF0DD2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==436418== by 0xF0DD32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==436418== by 0x31150E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==436418== by 0x307B19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==436418== by 0x30BF20: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==436418== by 0x30BDC0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==436418== by 0x30C457: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==436418== by 0x305F35: main (TestOffLatticeSimulation.cpp:19) ==436418== ==436418== Open file descriptor 8: /dev/shm/open_mpi.0000 ==436418== at 0xF906BCC: __open_nocancel (open64_nocancel.c:39) ==436418== by 0xF88AC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==436418== by 0xF112822: ??? ==436418== by 0xF11296F: ??? ==436418== by 0x14D356DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==436418== by 0x14D35938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==436418== by 0x14CEB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==436418== by 0x14C902DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==436418== by 0x1155E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==436418== by 0x114F7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==436418== by 0x101EED38: PetscInitialize (pinit.c:924) ==436418== by 0xF0DD2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==436418== by 0xF0DD32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==436418== by 0x31150E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==436418== by 0x307B19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==436418== by 0x30BF20: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==436418== by 0x30BDC0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==436418== by 0x30C457: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==436418== by 0x305F35: main (TestOffLatticeSimulation.cpp:19) ==436418== ==436418== Open file descriptor 115: ==436418== ==436418== ==436418== Open file descriptor 112: ==436418== ==436418== ==436418== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation_valgrind.txt ==436418== ==436418== ==436418== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==436418== ==436418== ==436418== ==436418== HEAP SUMMARY: ==436418== in use at exit: 700,686 bytes in 9,374 blocks ==436418== total heap usage: 12,851,725 allocs, 12,842,351 frees, 3,876,797,221 bytes allocated ==436418== ==436418== LEAK SUMMARY: ==436418== definitely lost: 0 bytes in 0 blocks ==436418== indirectly lost: 0 bytes in 0 blocks ==436418== possibly lost: 0 bytes in 0 blocks ==436418== still reachable: 56 bytes in 3 blocks ==436418== suppressed: 700,630 bytes in 9,371 blocks ==436418== Reachable blocks (those to which a pointer was found) are not shown. ==436418== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==436418== ==436418== For lists of detected and suppressed errors, rerun with: -s ==436418== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)