==435840== Memcheck, a memory error detector ==435840== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==435840== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==435840== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestTysonNovak2001OdeSystem -malloc_debug -malloc_dump -memory_info ==435840== Parent PID: 434199 ==435840== ==435840== ==435840== FILE DESCRIPTORS: 9 open (3 std) at exit. ==435840== Open file descriptor 12: ==435840== at 0xDB4822D: pipe (pipe.c:29) ==435840== by 0x1968D07D: ??? ==435840== by 0x14C454CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==435840== by 0x11130418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==435840== by 0x110C9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==435840== by 0xFDC0D38: PetscInitialize (pinit.c:924) ==435840== by 0xD7512DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==435840== by 0xD75132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==435840== by 0x12417A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==435840== by 0x11F743: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==435840== by 0x121D24: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==435840== by 0x121C20: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==435840== by 0x122233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==435840== by 0x11DF45: main (TestTysonNovak2001OdeSystem.cpp:18) ==435840== ==435840== Open file descriptor 8: /dev/shm/open_mpi.0000 ==435840== at 0xDB4CBCC: __open_nocancel (open64_nocancel.c:39) ==435840== by 0xDAD0C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==435840== by 0xD786822: ??? ==435840== by 0xD78696F: ??? ==435840== by 0x14CEA6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==435840== by 0x14CEA938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==435840== by 0x14CA0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==435840== by 0x14C452DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==435840== by 0x11130418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==435840== by 0x110C9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==435840== by 0xFDC0D38: PetscInitialize (pinit.c:924) ==435840== by 0xD7512DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==435840== by 0xD75132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==435840== by 0x12417A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==435840== by 0x11F743: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==435840== by 0x121D24: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==435840== by 0x121C20: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==435840== by 0x122233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==435840== by 0x11DF45: main (TestTysonNovak2001OdeSystem.cpp:18) ==435840== ==435840== Open file descriptor 115: ==435840== ==435840== ==435840== Open file descriptor 112: ==435840== ==435840== ==435840== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestTysonNovak2001OdeSystem_valgrind.txt ==435840== ==435840== ==435840== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==435840== ==435840== ==435840== ==435840== HEAP SUMMARY: ==435840== in use at exit: 700,722 bytes in 9,377 blocks ==435840== total heap usage: 60,684 allocs, 51,307 frees, 1,354,387,289 bytes allocated ==435840== ==435840== LEAK SUMMARY: ==435840== definitely lost: 0 bytes in 0 blocks ==435840== indirectly lost: 0 bytes in 0 blocks ==435840== possibly lost: 0 bytes in 0 blocks ==435840== still reachable: 24 bytes in 2 blocks ==435840== suppressed: 700,698 bytes in 9,375 blocks ==435840== Reachable blocks (those to which a pointer was found) are not shown. ==435840== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==435840== ==435840== For lists of detected and suppressed errors, rerun with: -s ==435840== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)