==492251== Memcheck, a memory error detector ==492251== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==492251== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==492251== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithBuskeUpdate -malloc_debug -malloc_dump -memory_info ==492251== Parent PID: 490513 ==492251== ==492251== ==492251== FILE DESCRIPTORS: 9 open (3 std) at exit. ==492251== Open file descriptor 12: ==492251== at 0xEBAA22D: pipe (pipe.c:29) ==492251== by 0x18A1F07D: ??? ==492251== by 0x140224CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==492251== by 0x10808418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==492251== by 0x107A1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==492251== by 0xF496D38: PetscInitialize (pinit.c:924) ==492251== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==492251== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==492251== by 0x2CC5B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==492251== by 0x2C3A9F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==492251== by 0x2C7EB8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==492251== by 0x2C7DB3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==492251== by 0x2C83C7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==492251== by 0x2C2295: main (TestNodeBasedCellPopulationWithBuskeUpdate.cpp:18) ==492251== ==492251== Open file descriptor 8: /dev/shm/open_mpi.0000 ==492251== at 0xEBAEBCC: __open_nocancel (open64_nocancel.c:39) ==492251== by 0xEB32C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==492251== by 0xE4A3822: ??? ==492251== by 0xE4A396F: ??? ==492251== by 0x140C76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==492251== by 0x140C7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==492251== by 0x1407D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==492251== by 0x140222DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==492251== by 0x10808418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==492251== by 0x107A1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==492251== by 0xF496D38: PetscInitialize (pinit.c:924) ==492251== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==492251== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==492251== by 0x2CC5B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==492251== by 0x2C3A9F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==492251== by 0x2C7EB8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==492251== by 0x2C7DB3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==492251== by 0x2C83C7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==492251== by 0x2C2295: main (TestNodeBasedCellPopulationWithBuskeUpdate.cpp:18) ==492251== ==492251== Open file descriptor 115: ==492251== ==492251== ==492251== Open file descriptor 112: ==492251== ==492251== ==492251== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithBuskeUpdate_valgrind.txt ==492251== ==492251== ==492251== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==492251== ==492251== ==492251== ==492251== HEAP SUMMARY: ==492251== in use at exit: 700,754 bytes in 9,378 blocks ==492251== total heap usage: 58,725 allocs, 49,347 frees, 1,355,239,862 bytes allocated ==492251== ==492251== LEAK SUMMARY: ==492251== definitely lost: 0 bytes in 0 blocks ==492251== indirectly lost: 0 bytes in 0 blocks ==492251== possibly lost: 0 bytes in 0 blocks ==492251== still reachable: 56 bytes in 3 blocks ==492251== suppressed: 700,698 bytes in 9,375 blocks ==492251== Reachable blocks (those to which a pointer was found) are not shown. ==492251== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==492251== ==492251== For lists of detected and suppressed errors, rerun with: -s ==492251== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)