==492253== Memcheck, a memory error detector ==492253== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==492253== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==492253== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithParticles -malloc_debug -malloc_dump -memory_info ==492253== Parent PID: 490513 ==492253== ==492253== ==492253== FILE DESCRIPTORS: 9 open (3 std) at exit. ==492253== Open file descriptor 12: ==492253== at 0xEC9322D: pipe (pipe.c:29) ==492253== by 0x18A1F07D: ??? ==492253== by 0x140224CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==492253== by 0x108EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==492253== by 0x10888D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==492253== by 0xF57FD38: PetscInitialize (pinit.c:924) ==492253== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==492253== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==492253== by 0x2E2C1E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==492253== by 0x2D9419: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==492253== by 0x2DDDE4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==492253== by 0x2DDC84: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==492253== by 0x2DE31B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==492253== by 0x2D7835: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==492253== ==492253== Open file descriptor 8: /dev/shm/open_mpi.0000 ==492253== at 0xEC97BCC: __open_nocancel (open64_nocancel.c:39) ==492253== by 0xEC1BC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==492253== by 0xE4A3822: ??? ==492253== by 0xE4A396F: ??? ==492253== by 0x140C76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==492253== by 0x140C7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==492253== by 0x1407D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==492253== by 0x140222DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==492253== by 0x108EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==492253== by 0x10888D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==492253== by 0xF57FD38: PetscInitialize (pinit.c:924) ==492253== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==492253== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==492253== by 0x2E2C1E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==492253== by 0x2D9419: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==492253== by 0x2DDDE4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==492253== by 0x2DDC84: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==492253== by 0x2DE31B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==492253== by 0x2D7835: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==492253== ==492253== Open file descriptor 115: ==492253== ==492253== ==492253== Open file descriptor 112: ==492253== ==492253== ==492253== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithParticles_valgrind.txt ==492253== ==492253== ==492253== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==492253== ==492253== ==492253== ==492253== HEAP SUMMARY: ==492253== in use at exit: 700,754 bytes in 9,378 blocks ==492253== total heap usage: 105,328 allocs, 95,950 frees, 1,361,240,937 bytes allocated ==492253== ==492253== LEAK SUMMARY: ==492253== definitely lost: 0 bytes in 0 blocks ==492253== indirectly lost: 0 bytes in 0 blocks ==492253== possibly lost: 0 bytes in 0 blocks ==492253== still reachable: 56 bytes in 3 blocks ==492253== suppressed: 700,698 bytes in 9,375 blocks ==492253== Reachable blocks (those to which a pointer was found) are not shown. ==492253== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==492253== ==492253== For lists of detected and suppressed errors, rerun with: -s ==492253== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)