==492681== Memcheck, a memory error detector ==492681== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==492681== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==492681== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==492681== Parent PID: 490513 ==492681== ==492681== ==492681== FILE DESCRIPTORS: 9 open (3 std) at exit. ==492681== Open file descriptor 12: ==492681== at 0xEC9322D: pipe (pipe.c:29) ==492681== by 0x18A1F07D: ??? ==492681== by 0x140224CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==492681== by 0x108EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==492681== by 0x10888D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==492681== by 0xF57FD38: PetscInitialize (pinit.c:924) ==492681== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==492681== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==492681== by 0x213670: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==492681== by 0x20AE19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==492681== by 0x20EA68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==492681== by 0x20E908: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==492681== by 0x20EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==492681== by 0x209235: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==492681== ==492681== Open file descriptor 8: /dev/shm/open_mpi.0000 ==492681== at 0xEC97BCC: __open_nocancel (open64_nocancel.c:39) ==492681== by 0xEC1BC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==492681== by 0xE4A3822: ??? ==492681== by 0xE4A396F: ??? ==492681== by 0x140C76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==492681== by 0x140C7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==492681== by 0x1407D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==492681== by 0x140222DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==492681== by 0x108EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==492681== by 0x10888D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==492681== by 0xF57FD38: PetscInitialize (pinit.c:924) ==492681== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==492681== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==492681== by 0x213670: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==492681== by 0x20AE19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==492681== by 0x20EA68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==492681== by 0x20E908: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==492681== by 0x20EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==492681== by 0x209235: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==492681== ==492681== Open file descriptor 115: ==492681== ==492681== ==492681== Open file descriptor 112: ==492681== ==492681== ==492681== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulation_valgrind.txt ==492681== ==492681== ==492681== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==492681== ==492681== ==492681== ==492681== HEAP SUMMARY: ==492681== in use at exit: 700,718 bytes in 9,375 blocks ==492681== total heap usage: 17,974,442 allocs, 17,965,067 frees, 30,089,545,229 bytes allocated ==492681== ==492681== LEAK SUMMARY: ==492681== definitely lost: 0 bytes in 0 blocks ==492681== indirectly lost: 0 bytes in 0 blocks ==492681== possibly lost: 0 bytes in 0 blocks ==492681== still reachable: 88 bytes in 4 blocks ==492681== suppressed: 700,630 bytes in 9,371 blocks ==492681== Reachable blocks (those to which a pointer was found) are not shown. ==492681== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==492681== ==492681== For lists of detected and suppressed errors, rerun with: -s ==492681== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)