==492079== Memcheck, a memory error detector ==492079== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==492079== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==492079== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestTysonNovak2001OdeSystem -malloc_debug -malloc_dump -memory_info ==492079== Parent PID: 490513 ==492079== ==492079== ==492079== FILE DESCRIPTORS: 9 open (3 std) at exit. ==492079== Open file descriptor 12: ==492079== at 0xD25222D: pipe (pipe.c:29) ==492079== by 0x18A1E07D: ??? ==492079== by 0x13FEA4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==492079== by 0x104C1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==492079== by 0x1045AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==492079== by 0xF151D38: PetscInitialize (pinit.c:924) ==492079== by 0xCE5C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==492079== by 0xCE5C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==492079== by 0x12417A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==492079== by 0x11F743: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==492079== by 0x121D24: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==492079== by 0x121C20: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==492079== by 0x122233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==492079== by 0x11DF45: main (TestTysonNovak2001OdeSystem.cpp:18) ==492079== ==492079== Open file descriptor 8: /dev/shm/open_mpi.0000 ==492079== at 0xD256BCC: __open_nocancel (open64_nocancel.c:39) ==492079== by 0xD1DAC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==492079== by 0xCE90822: ??? ==492079== by 0xCE9096F: ??? ==492079== by 0x1408F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==492079== by 0x1408F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==492079== by 0x14045922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==492079== by 0x13FEA2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==492079== by 0x104C1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==492079== by 0x1045AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==492079== by 0xF151D38: PetscInitialize (pinit.c:924) ==492079== by 0xCE5C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==492079== by 0xCE5C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==492079== by 0x12417A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==492079== by 0x11F743: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==492079== by 0x121D24: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==492079== by 0x121C20: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==492079== by 0x122233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==492079== by 0x11DF45: main (TestTysonNovak2001OdeSystem.cpp:18) ==492079== ==492079== Open file descriptor 115: ==492079== ==492079== ==492079== Open file descriptor 112: ==492079== ==492079== ==492079== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestTysonNovak2001OdeSystem_valgrind.txt ==492079== ==492079== ==492079== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==492079== ==492079== ==492079== ==492079== HEAP SUMMARY: ==492079== in use at exit: 700,722 bytes in 9,377 blocks ==492079== total heap usage: 60,150 allocs, 50,773 frees, 1,354,339,617 bytes allocated ==492079== ==492079== LEAK SUMMARY: ==492079== definitely lost: 0 bytes in 0 blocks ==492079== indirectly lost: 0 bytes in 0 blocks ==492079== possibly lost: 0 bytes in 0 blocks ==492079== still reachable: 24 bytes in 2 blocks ==492079== suppressed: 700,698 bytes in 9,375 blocks ==492079== Reachable blocks (those to which a pointer was found) are not shown. ==492079== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==492079== ==492079== For lists of detected and suppressed errors, rerun with: -s ==492079== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)