==549541== Memcheck, a memory error detector ==549541== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==549541== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==549541== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/Test2dVertexBasedSimulationWithSrnModels -malloc_debug -malloc_dump -memory_info ==549541== Parent PID: 547643 ==549541== ==549541== ==549541== FILE DESCRIPTORS: 9 open (3 std) at exit. ==549541== Open file descriptor 12: ==549541== at 0xF7EE22D: pipe (pipe.c:29) ==549541== by 0x196A407D: ??? ==549541== by 0x14CB14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==549541== by 0x1148E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==549541== by 0x11427D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==549541== by 0x1011ED38: PetscInitialize (pinit.c:924) ==549541== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==549541== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==549541== by 0x1221C2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==549541== by 0x11D90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==549541== by 0x11FCFC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==549541== by 0x11FB9C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==549541== by 0x120233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==549541== by 0x11BD35: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==549541== ==549541== Open file descriptor 8: /dev/shm/open_mpi.0000 ==549541== at 0xF7F2BCC: __open_nocancel (open64_nocancel.c:39) ==549541== by 0xF776C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==549541== by 0xF129822: ??? ==549541== by 0xF12996F: ??? ==549541== by 0x14D566DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==549541== by 0x14D56938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==549541== by 0x14D0C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==549541== by 0x14CB12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==549541== by 0x1148E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==549541== by 0x11427D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==549541== by 0x1011ED38: PetscInitialize (pinit.c:924) ==549541== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==549541== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==549541== by 0x1221C2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==549541== by 0x11D90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==549541== by 0x11FCFC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==549541== by 0x11FB9C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==549541== by 0x120233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==549541== by 0x11BD35: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==549541== ==549541== Open file descriptor 115: ==549541== ==549541== ==549541== Open file descriptor 112: ==549541== ==549541== ==549541== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/Test2dVertexBasedSimulationWithSrnModels_valgrind.txt ==549541== ==549541== ==549541== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==549541== ==549541== ==549541== ==549541== HEAP SUMMARY: ==549541== in use at exit: 700,754 bytes in 9,378 blocks ==549541== total heap usage: 1,126,773 allocs, 1,117,395 frees, 1,431,021,782 bytes allocated ==549541== ==549541== LEAK SUMMARY: ==549541== definitely lost: 0 bytes in 0 blocks ==549541== indirectly lost: 0 bytes in 0 blocks ==549541== possibly lost: 0 bytes in 0 blocks ==549541== still reachable: 56 bytes in 3 blocks ==549541== suppressed: 700,698 bytes in 9,375 blocks ==549541== Reachable blocks (those to which a pointer was found) are not shown. ==549541== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==549541== ==549541== For lists of detected and suppressed errors, rerun with: -s ==549541== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)