==549494== Memcheck, a memory error detector ==549494== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==549494== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==549494== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithParticles -malloc_debug -malloc_dump -memory_info ==549494== Parent PID: 547643 ==549494== ==549494== ==549494== FILE DESCRIPTORS: 9 open (3 std) at exit. ==549494== Open file descriptor 12: ==549494== at 0xF91922D: pipe (pipe.c:29) ==549494== by 0x196A507D: ??? ==549494== by 0x14CB14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==549494== by 0x11575418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==549494== by 0x1150ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==549494== by 0x10205D38: PetscInitialize (pinit.c:924) ==549494== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==549494== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==549494== by 0x2E2C1E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==549494== by 0x2D9419: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==549494== by 0x2DDDE4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==549494== by 0x2DDC84: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==549494== by 0x2DE31B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==549494== by 0x2D7835: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==549494== ==549494== Open file descriptor 8: /dev/shm/open_mpi.0000 ==549494== at 0xF91DBCC: __open_nocancel (open64_nocancel.c:39) ==549494== by 0xF8A1C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==549494== by 0xF129822: ??? ==549494== by 0xF12996F: ??? ==549494== by 0x14D566DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==549494== by 0x14D56938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==549494== by 0x14D0C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==549494== by 0x14CB12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==549494== by 0x11575418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==549494== by 0x1150ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==549494== by 0x10205D38: PetscInitialize (pinit.c:924) ==549494== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==549494== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==549494== by 0x2E2C1E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==549494== by 0x2D9419: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==549494== by 0x2DDDE4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==549494== by 0x2DDC84: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==549494== by 0x2DE31B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==549494== by 0x2D7835: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==549494== ==549494== Open file descriptor 115: ==549494== ==549494== ==549494== Open file descriptor 112: ==549494== ==549494== ==549494== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithParticles_valgrind.txt ==549494== ==549494== ==549494== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==549494== ==549494== ==549494== ==549494== HEAP SUMMARY: ==549494== in use at exit: 700,754 bytes in 9,378 blocks ==549494== total heap usage: 105,865 allocs, 96,487 frees, 1,361,289,529 bytes allocated ==549494== ==549494== LEAK SUMMARY: ==549494== definitely lost: 0 bytes in 0 blocks ==549494== indirectly lost: 0 bytes in 0 blocks ==549494== possibly lost: 0 bytes in 0 blocks ==549494== still reachable: 56 bytes in 3 blocks ==549494== suppressed: 700,698 bytes in 9,375 blocks ==549494== Reachable blocks (those to which a pointer was found) are not shown. ==549494== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==549494== ==549494== For lists of detected and suppressed errors, rerun with: -s ==549494== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)