==549884== Memcheck, a memory error detector ==549884== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==549884== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==549884== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==549884== Parent PID: 547643 ==549884== ==549884== ==549884== FILE DESCRIPTORS: 9 open (3 std) at exit. ==549884== Open file descriptor 12: ==549884== at 0xF91922D: pipe (pipe.c:29) ==549884== by 0x196A507D: ??? ==549884== by 0x14CB14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==549884== by 0x11575418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==549884== by 0x1150ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==549884== by 0x10205D38: PetscInitialize (pinit.c:924) ==549884== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==549884== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==549884== by 0x213670: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==549884== by 0x20AE19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==549884== by 0x20EA68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==549884== by 0x20E908: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==549884== by 0x20EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==549884== by 0x209235: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==549884== ==549884== Open file descriptor 8: /dev/shm/open_mpi.0000 ==549884== at 0xF91DBCC: __open_nocancel (open64_nocancel.c:39) ==549884== by 0xF8A1C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==549884== by 0xF129822: ??? ==549884== by 0xF12996F: ??? ==549884== by 0x14D566DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==549884== by 0x14D56938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==549884== by 0x14D0C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==549884== by 0x14CB12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==549884== by 0x11575418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==549884== by 0x1150ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==549884== by 0x10205D38: PetscInitialize (pinit.c:924) ==549884== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==549884== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==549884== by 0x213670: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==549884== by 0x20AE19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==549884== by 0x20EA68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==549884== by 0x20E908: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==549884== by 0x20EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==549884== by 0x209235: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==549884== ==549884== Open file descriptor 115: ==549884== ==549884== ==549884== Open file descriptor 112: ==549884== ==549884== ==549884== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulation_valgrind.txt ==549884== ==549884== ==549884== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==549884== ==549884== ==549884== ==549884== HEAP SUMMARY: ==549884== in use at exit: 700,718 bytes in 9,375 blocks ==549884== total heap usage: 17,828,643 allocs, 17,819,268 frees, 30,061,826,010 bytes allocated ==549884== ==549884== LEAK SUMMARY: ==549884== definitely lost: 0 bytes in 0 blocks ==549884== indirectly lost: 0 bytes in 0 blocks ==549884== possibly lost: 0 bytes in 0 blocks ==549884== still reachable: 88 bytes in 4 blocks ==549884== suppressed: 700,630 bytes in 9,371 blocks ==549884== Reachable blocks (those to which a pointer was found) are not shown. ==549884== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==549884== ==549884== For lists of detected and suppressed errors, rerun with: -s ==549884== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)