==563253== Memcheck, a memory error detector ==563253== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==563253== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==563253== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningImmersedBoundarySimulationsTutorial -malloc_debug -malloc_dump -memory_info ==563253== Parent PID: 547643 ==563253== ==563253== ==563253== FILE DESCRIPTORS: 9 open (3 std) at exit. ==563253== Open file descriptor 12: ==563253== at 0x10CA522D: pipe (pipe.c:29) ==563253== by 0x196A507D: ??? ==563253== by 0x14C134CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==563253== by 0x105AD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==563253== by 0x10546D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==563253== by 0xF21DD38: PetscInitialize (pinit.c:924) ==563253== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==563253== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==563253== by 0x121D4D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==563253== by 0x11D533: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==563253== by 0x11F8F6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==563253== by 0x11F7F1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==563253== by 0x11FE05: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==563253== by 0x11BD35: main (TestRunningImmersedBoundarySimulationsTutorial.cpp:18) ==563253== ==563253== Open file descriptor 8: /dev/shm/open_mpi.0000 ==563253== at 0x10CA9BCC: __open_nocancel (open64_nocancel.c:39) ==563253== by 0x10C2DC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==563253== by 0x104A7822: ??? ==563253== by 0x104A796F: ??? ==563253== by 0x14CB86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==563253== by 0x14CB8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==563253== by 0x14C6E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==563253== by 0x14C132DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==563253== by 0x105AD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==563253== by 0x10546D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==563253== by 0xF21DD38: PetscInitialize (pinit.c:924) ==563253== by 0xF0F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==563253== by 0xF0F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==563253== by 0x121D4D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==563253== by 0x11D533: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==563253== by 0x11F8F6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==563253== by 0x11F7F1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==563253== by 0x11FE05: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==563253== by 0x11BD35: main (TestRunningImmersedBoundarySimulationsTutorial.cpp:18) ==563253== ==563253== Open file descriptor 115: ==563253== ==563253== ==563253== Open file descriptor 112: ==563253== ==563253== ==563253== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningImmersedBoundarySimulationsTutorial_valgrind.txt ==563253== ==563253== ==563253== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==563253== ==563253== ==563253== ==563253== HEAP SUMMARY: ==563253== in use at exit: 700,686 bytes in 9,374 blocks ==563253== total heap usage: 657,215 allocs, 647,841 frees, 1,527,947,998 bytes allocated ==563253== ==563253== LEAK SUMMARY: ==563253== definitely lost: 0 bytes in 0 blocks ==563253== indirectly lost: 0 bytes in 0 blocks ==563253== possibly lost: 0 bytes in 0 blocks ==563253== still reachable: 56 bytes in 3 blocks ==563253== suppressed: 700,630 bytes in 9,371 blocks ==563253== Reachable blocks (those to which a pointer was found) are not shown. ==563253== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==563253== ==563253== For lists of detected and suppressed errors, rerun with: -s ==563253== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)